Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.7□□□□□ -2.14
SSX3Q99909 AL133216.2-202ENST00000634512 349 ntBASIC1.7□□□□□ -2.14
SSX3Q99909 AL159152.1-201ENST00000635019 2587 ntBASIC1.7□□□□□ -2.14
SSX3Q99909 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
SSX3Q99909 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
SSX3Q99909 RNU6-418P-201ENST00000384035 107 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 RNU6-439P-201ENST00000384188 106 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 RNU6-541P-201ENST00000384709 110 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AC004866.1-201ENST00000411748 78 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 MTCO3P46-201ENST00000425787 232 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 USP9YP30-201ENST00000430729 455 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.69□□□□□ -2.14
SSX3Q99909 AL357134.1-201ENST00000445848 426 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 AC114982.1-201ENST00000469402 321 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 MTND5P5-201ENST00000503764 376 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AC097473.1-201ENST00000508142 408 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AC008834.1-201ENST00000511612 175 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.69□□□□□ -2.14
SSX3Q99909 AL158827.2-201ENST00000602494 330 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 AL691447.3-201ENST00000635020 330 ntBASIC1.69□□□□□ -2.14
SSX3Q99909 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
SSX3Q99909 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SSX3Q99909 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.69□□□□□ -2.14
SSX3Q99909 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.69□□□□□ -2.14
SSX3Q99909 MIR126-201ENST00000362291 85 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 SNORD114-1-201ENST00000362705 72 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 RNU6-1059P-201ENST00000363752 98 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 Y_RNA.248-201ENST00000364501 109 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 Y_RNA.319-201ENST00000365138 92 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 Y_RNA.533-201ENST00000384596 114 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 AC019129.1-201ENST00000403786 261 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 RNU6-174P-201ENST00000410406 106 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 NCOR1P3-201ENST00000420479 303 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 AC243428.1-201ENST00000421099 264 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 UBL5P3-201ENST00000475112 231 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.68□□□□□ -2.14
SSX3Q99909 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.68□□□□□ -2.14
SSX3Q99909 AC016925.2-201ENST00000605108 242 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
SSX3Q99909 CASC19-280ENST00000642102 1351 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 ZNF299P-201ENST00000406845 1804 ntBASIC1.68□□□□□ -2.14
SSX3Q99909 MIR424-201ENST00000362227 98 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 SNORD115-8-201ENST00000363856 82 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RNU6-1305P-201ENST00000364353 104 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 SNORD115-38-201ENST00000365037 82 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RNU6-245P-201ENST00000384020 107 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 MIR504-201ENST00000385065 83 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AL033519.2-201ENST00000403958 392 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 MIR548F5-201ENST00000408421 86 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AC074085.1-201ENST00000413598 418 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 HMGB1P18-201ENST00000438801 619 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AC074290.1-201ENST00000448883 135 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AC107399.1-201ENST00000451226 265 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 ATP5J2P3-201ENST00000451550 258 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 SNORD5.1-201ENST00000458800 75 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AC010409.1-201ENST00000487382 476 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RPL30P10-201ENST00000488148 337 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.67□□□□□ -2.14
SSX3Q99909 AC067942.3-201ENST00000512025 362 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RNU7-175P-201ENST00000515915 61 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RNU2-34P-201ENST00000516534 121 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 SNORA44.1-201ENST00000517031 108 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 RNU6-58P-201ENST00000517143 103 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
SSX3Q99909 MIR4285-201ENST00000581001 85 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AC010900.2-201ENST00000604508 210 ntBASIC1.67□□□□□ -2.14
SSX3Q99909 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.67□□□□□ -2.14
SSX3Q99909 RNU6-842P-201ENST00000384269 107 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 MIR30A-201ENST00000385092 71 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
SSX3Q99909 AL079342.1-201ENST00000401460 267 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 MIR548K-201ENST00000408406 116 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 RPS20P15-201ENST00000412792 311 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 AL445646.1-201ENST00000431784 216 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 RPS3AP52-201ENST00000435639 297 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.66□□□□□ -2.14
SSX3Q99909 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.66□□□□□ -2.14
SSX3Q99909 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 RN7SKP210-201ENST00000459176 261 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 AC046134.1-201ENST00000514454 666 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 RNU6-948P-201ENST00000516374 107 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 RNU6-1016P-201ENST00000516689 94 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 SNORA31.17-201ENST00000516953 127 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 RNU6-856P-201ENST00000516959 98 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 AL590705.4-201ENST00000532209 134 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 CBX3P4-201ENST00000538909 354 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 HSBP1P1-201ENST00000555205 166 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 AC005668.1-201ENST00000571142 476 ntBASIC1.66□□□□□ -2.14
SSX3Q99909 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.66□□□□□ -2.14
SSX3Q99909 MIR5094-201ENST00000578766 85 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms