Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 RNA5SP276-201ENST00000362580 94 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 RNU5F-3P-201ENST00000363767 117 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 Y_RNA.405-201ENST00000383979 100 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 Y_RNA.451-201ENST00000384200 100 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 Y_RNA.524-201ENST00000384564 100 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 Y_RNA.561-201ENST00000384694 100 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AL356432.1-201ENST00000405809 419 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC004866.1-201ENST00000411748 78 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AL158823.1-201ENST00000418441 478 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 Z98742.3-201ENST00000418637 326 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AL353689.1-201ENST00000438895 199 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 MTCO1P44-201ENST00000441935 243 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AL357134.1-201ENST00000445848 426 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 RPL23AP3-201ENST00000453844 468 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC010531.2-201ENST00000465012 153 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC114982.1-201ENST00000469402 321 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.9□□□□□ -2.11
CPNE1Q99829 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.9□□□□□ -2.11
CPNE1Q99829 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 RNU2-34P-201ENST00000516534 121 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 RNU6-307P-201ENST00000516743 106 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.9□□□□□ -2.11
CPNE1Q99829 AC005899.2-201ENST00000584353 90 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC243960.4-201ENST00000600532 288 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 AC100812.1-201ENST00000607622 580 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC1.9□□□□□ -2.11
CPNE1Q99829 SDR42E1P4-201ENST00000620894 481 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 uc_338.20-201ENST00000621563 178 ntBASIC1.9□□□□□ -2.11
CPNE1Q99829 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
CPNE1Q99829 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.9□□□□□ -2.11
CPNE1Q99829 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 RNU6-280P-201ENST00000364145 104 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 RN7SKP223-201ENST00000410582 62 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 DPH3P2-201ENST00000422618 250 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 MTCO3P29-201ENST00000432119 779 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.89□□□□□ -2.11
CPNE1Q99829 AC008413.1-201ENST00000511864 177 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.89□□□□□ -2.11
CPNE1Q99829 Y_RNA.706-201ENST00000516933 99 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 AC005786.1-201ENST00000588553 154 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 AL162373.1-201ENST00000620433 407 ntBASIC1.89□□□□□ -2.11
CPNE1Q99829 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.89□□□□□ -2.11
CPNE1Q99829 MIR586-201ENST00000385035 97 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RNU6-159P-201ENST00000391080 106 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 SNORA75.4-201ENST00000391278 119 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RNU2-20P-201ENST00000410425 191 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RNA5SP501-201ENST00000410990 112 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.88□□□□□ -2.11
CPNE1Q99829 AC074290.1-201ENST00000448883 135 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RNA5SP233-201ENST00000459153 113 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 MTND4P17-201ENST00000470444 350 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RPL7P42-201ENST00000481005 679 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AC067942.3-201ENST00000512025 362 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 SNORA25.14-201ENST00000516481 132 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 MIR5701-3-201ENST00000578890 82 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AC005730.3-201ENST00000583067 366 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 MIR5701-1-201ENST00000585138 82 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 UBE2V2P2-201ENST00000587677 504 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AC005034.5-201ENST00000604219 466 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.88□□□□□ -2.11
CPNE1Q99829 SNORD11B-201ENST00000607707 90 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AC005014.2-201ENST00000607795 599 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 MIR5701-2-201ENST00000615634 82 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AL590808.1-201ENST00000618696 141 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
CPNE1Q99829 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
CPNE1Q99829 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CPNE1Q99829 RNU1-62P-201ENST00000362599 164 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 RNY1P16-201ENST00000363063 111 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 Y_RNA.111-201ENST00000363248 100 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SNORA72.1-201ENST00000363485 129 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 RNU6-873P-201ENST00000363833 107 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SNORA16.1-201ENST00000364597 132 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 Y_RNA.404-201ENST00000383978 102 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SNORA48.1-201ENST00000390879 135 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 RNU6-700P-201ENST00000391043 107 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.87□□□□□ -2.11
CPNE1Q99829 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CPNE1Q99829 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.87□□□□□ -2.11
CPNE1Q99829 HMGN2P9-201ENST00000476875 229 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.87□□□□□ -2.11
CPNE1Q99829 RNU6-948P-201ENST00000516374 107 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 RNA5SP384-201ENST00000516615 116 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SUMO2P18-201ENST00000518873 252 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AC105029.1-201ENST00000520250 669 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.87□□□□□ -2.11
CPNE1Q99829 AP000889.1-201ENST00000530968 660 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AL121579.1-201ENST00000555129 305 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AL109918.3-201ENST00000603072 338 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AC016727.1-205ENST00000605437 569 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AL355802.3-201ENST00000607571 545 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AL773524.1-201ENST00000614065 229 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.87□□□□□ -2.11
CPNE1Q99829 AC008873.1-201ENST00000625051 138 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms