Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 RNU6-991P-201ENST00000516168 107 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 DEFB131C-201ENST00000528817 165 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 RRN3P3-201ENST00000549207 578 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS1Q99742 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.42□□□□□ -2.02
NPAS1Q99742 MIR4753-201ENST00000585119 83 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 AC125232.2-201ENST00000592457 143 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 U4atac.1-201ENST00000618345 95 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
NPAS1Q99742 AC135776.4-201ENST00000624300 1904 ntBASIC2.42□□□□□ -2.02
NPAS1Q99742 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
NPAS1Q99742 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
NPAS1Q99742 AC062016.1-201ENST00000355719 319 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 RNU6-545P-201ENST00000362681 104 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 RNU6-1072P-201ENST00000384703 107 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 RNU6-443P-201ENST00000384780 107 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 MIR606-201ENST00000384851 96 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 RNA5SP181-201ENST00000410246 98 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 ARL5AP4-201ENST00000430731 512 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 AL118496.2-201ENST00000448300 230 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 AC091179.3-201ENST00000474761 144 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 SNORA9.3-201ENST00000516383 129 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 SNORA31.11-201ENST00000516528 139 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.41□□□□□ -2.02
NPAS1Q99742 AP002770.2-201ENST00000543613 532 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 MIR3126-201ENST00000577443 74 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 MIR4635-201ENST00000583759 79 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 MIR4658-201ENST00000584344 65 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 AL390123.1-201ENST00000603216 237 ntBASIC2.41□□□□□ -2.02
NPAS1Q99742 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
NPAS1Q99742 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.4□□□□□ -2.02
NPAS1Q99742 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
NPAS1Q99742 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.4□□□□□ -2.02
NPAS1Q99742 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.02
NPAS1Q99742 MIR6073-201ENST00000352083 89 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 RNU1-76P-201ENST00000362903 159 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 Y_RNA.162-201ENST00000363683 102 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 RNU4-50P-201ENST00000364361 141 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 Y_RNA.498-201ENST00000384460 102 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 MIR329-1-201ENST00000385028 80 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 SNORD78.2-201ENST00000391076 69 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 AC074290.1-201ENST00000448883 135 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 PCNPP5-201ENST00000452246 481 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 AC112492.4-201ENST00000456549 352 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.4□□□□□ -2.03
NPAS1Q99742 RNU6-344P-201ENST00000516635 111 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 RN7SKP49-201ENST00000516675 260 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 RNA5SP402-201ENST00000517148 110 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 CYCSP23-201ENST00000519781 313 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.4□□□□□ -2.03
NPAS1Q99742 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.4□□□□□ -2.03
NPAS1Q99742 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.4□□□□□ -2.03
NPAS1Q99742 AC104695.3-201ENST00000604052 296 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 AL078596.1-201ENST00000624856 447 ntBASIC2.4□□□□□ -2.03
NPAS1Q99742 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.4□□□□□ -2.03
NPAS1Q99742 SNORD87-201ENST00000364849 89 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 RNU6-611P-201ENST00000384276 104 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 RNU6-318P-201ENST00000384283 103 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 Y_RNA.471-201ENST00000384312 102 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 RNY3P4-201ENST00000384428 101 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 MIR300-201ENST00000401138 83 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 IFNA11P-201ENST00000446352 526 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 AC007395.1-201ENST00000451333 677 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 AL109933.2-201ENST00000452651 260 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.39□□□□□ -2.03
NPAS1Q99742 AC093852.1-201ENST00000503587 266 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.39□□□□□ -2.03
NPAS1Q99742 MIR4659A-201ENST00000580269 81 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 MIR4680-201ENST00000580906 66 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 AC011476.5-201ENST00000615594 130 ntBASIC2.39□□□□□ -2.03
NPAS1Q99742 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
NPAS1Q99742 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.39□□□□□ -2.03
NPAS1Q99742 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.38□□□□□ -2.03
NPAS1Q99742 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
NPAS1Q99742 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC2.38□□□□□ -2.03
NPAS1Q99742 Y_RNA.415-201ENST00000384012 112 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 Y_RNA.455-201ENST00000384230 98 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 MIR9-1-201ENST00000385198 89 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 RNA5SP213-201ENST00000391031 106 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 Y_RNA.645-201ENST00000391229 102 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 AC004866.1-201ENST00000411748 78 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC2.38□□□□□ -2.03
NPAS1Q99742 FCF1P4-201ENST00000448326 183 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 AC114982.1-201ENST00000469402 321 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 SCARNA15.1-201ENST00000516384 125 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 AC022616.4-201ENST00000522985 181 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.38□□□□□ -2.03
NPAS1Q99742 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
NPAS1Q99742 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
NPAS1Q99742 SNORD115-3-201ENST00000363100 82 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 SNORD31B-201ENST00000364977 69 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNU6-1145P-201ENST00000384246 107 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNU6-1160P-201ENST00000384546 104 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNA5SP210-201ENST00000391034 120 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 RNU6-823P-201ENST00000391042 103 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 MIR1283-1-201ENST00000408494 87 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.37□□□□□ -2.03
NPAS1Q99742 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC018868.1-201ENST00000491307 315 ntBASIC2.37□□□□□ -2.03
NPAS1Q99742 AC010469.2-201ENST00000496412 480 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms