Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.74□□□□□ -1.97
TIMP4Q99727 AC233702.2-202ENST00000562547 291 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.74□□□□□ -1.97
TIMP4Q99727 MIR3145-201ENST00000580727 82 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AL034555.1-201ENST00000604816 211 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC005828.6-201ENST00000606610 232 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 BX322639.1-202ENST00000423987 2213 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 AC099654.7-201ENST00000635788 2127 ntBASIC2.74□□□□□ -1.97
TIMP4Q99727 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 AC092435.3-201ENST00000565538 3654 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.73□□□□□ -1.97
TIMP4Q99727 MAPK10-266ENST00000641066 6555 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 Y_RNA.40-201ENST00000362645 93 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNU1-35P-201ENST00000362782 153 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 SNORD114-19-201ENST00000363072 75 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 Y_RNA.111-201ENST00000363248 100 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 SNORA51.4-201ENST00000364993 124 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 DYNLT3P1-201ENST00000378574 347 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 CD24P4-201ENST00000382840 243 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNU6-748P-201ENST00000384648 107 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNA5SP252-201ENST00000391131 119 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 RAB28P5-201ENST00000427490 651 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC005042.3-201ENST00000453230 174 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNU7-120P-201ENST00000459334 63 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 Y_RNA.638-201ENST00000459374 113 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNU7-23P-201ENST00000459465 62 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNY3P16-201ENST00000516338 101 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 RNU6-107P-201ENST00000516643 102 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 SNORD19.2-201ENST00000516978 73 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.73□□□□□ -1.97
TIMP4Q99727 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC2.73□□□□□ -1.97
TIMP4Q99727 MIR3136-201ENST00000583498 78 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.73□□□□□ -1.97
TIMP4Q99727 AC010620.2-201ENST00000600135 313 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 AC022441.3-201ENST00000605737 136 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC091932.3-201ENST00000624223 323 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC006386.2-201ENST00000624491 75 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 AC012005.1-201ENST00000624575 75 ntBASIC2.73□□□□□ -1.97
TIMP4Q99727 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.73□□□□□ -1.97
TIMP4Q99727 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
TIMP4Q99727 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
TIMP4Q99727 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
TIMP4Q99727 AC092593.1-201ENST00000515413 1815 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 RNU6-1020P-201ENST00000363684 107 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 RNU6-923P-201ENST00000364753 107 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
TIMP4Q99727 MIR320B2-201ENST00000408479 138 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 ELOCP21-201ENST00000412558 336 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.72□□□□□ -1.97
TIMP4Q99727 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC2.72□□□□□ -1.97
TIMP4Q99727 AC074198.2-201ENST00000508153 258 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.72□□□□□ -1.97
TIMP4Q99727 AC074133.1-201ENST00000515696 183 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 RNA5SP76-201ENST00000516277 87 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 RNU6-155P-201ENST00000516347 100 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 CYCSP23-201ENST00000519781 313 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 Z83818.1-201ENST00000603584 150 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 SNRPGP20-201ENST00000604477 205 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 AL590240.4-201ENST00000616908 390 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 AL137790.1-201ENST00000634283 177 ntBASIC2.72□□□□□ -1.97
TIMP4Q99727 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.72□□□□□ -1.97
TIMP4Q99727 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC2.71□□□□□ -1.97
TIMP4Q99727 AL035425.3-201ENST00000564206 4996 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TIMP4Q99727 RNU4-80P-201ENST00000363200 141 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 RNU6-682P-201ENST00000363843 106 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 SNORA80A-201ENST00000363922 136 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 SNORA18.3-201ENST00000384122 132 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 SNORA46.1-201ENST00000391069 153 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AL590004.2-201ENST00000404787 371 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 RNA5SP475-201ENST00000410568 110 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 RN7SKP51-201ENST00000410781 304 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AC024067.1-201ENST00000426199 223 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC2.71□□□□□ -1.98
TIMP4Q99727 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.71□□□□□ -1.98
TIMP4Q99727 IFNA11P-201ENST00000446352 526 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AL031183.1-201ENST00000457667 207 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AP001324.2-201ENST00000461163 319 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AC112771.1-201ENST00000463581 102 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AL121594.1-201ENST00000475906 575 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.71□□□□□ -1.98
TIMP4Q99727 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.71□□□□□ -1.98
TIMP4Q99727 RN7SKP282-201ENST00000516824 299 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.71□□□□□ -1.98
TIMP4Q99727 AL138880.2-201ENST00000616214 239 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AC007318.2-201ENST00000620999 243 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AC091564.4-201ENST00000533934 2194 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AL109809.4-201ENST00000603520 2185 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 AL365361.1-201ENST00000566942 3481 ntBASIC2.71□□□□□ -1.98
TIMP4Q99727 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.71□□□□□ -1.98
TIMP4Q99727 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
TIMP4Q99727 AP003122.5-201ENST00000527668 3766 ntBASIC2.71□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 173.8 ms