Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 RNU6-948P-201ENST00000516374 107 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RNU1-142P-201ENST00000516682 145 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 MIR4300-201ENST00000581016 96 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 DEFB131E-202ENST00000602581 683 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC016911.1-201ENST00000613297 452 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC023158.2-201ENST00000614876 543 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC007014.2-201ENST00000615581 479 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 uc_338.34-201ENST00000617467 174 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC015726.2-201ENST00000620112 122 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RNU6-833P-201ENST00000363486 107 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 MIR300-201ENST00000401138 83 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 SNORD71-201ENST00000411292 86 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC245047.3-201ENST00000429428 127 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RPL23AP30-201ENST00000432419 501 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 ELOCP24-201ENST00000456370 334 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC074133.1-201ENST00000515696 183 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AL162424.1-201ENST00000602325 221 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC026741.1-201ENST00000605892 482 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RNU4-5P-201ENST00000607255 135 ntBASIC-0.29□□□□□ -2.46
IFT140Q96RY7 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC-0.29□□□□□ -2.46
IFT140Q96RY7 RNU6-1141P-201ENST00000364520 107 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 SNORA12.1-201ENST00000390873 148 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 MRPL42P3-201ENST00000401492 326 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 SNORA40.8-201ENST00000411034 126 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 ELOCP17-201ENST00000414751 326 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 VPS26BP1-201ENST00000417155 755 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 AC010975.2-201ENST00000427781 588 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC-0.3□□□□□ -2.46
IFT140Q96RY7 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC-0.3□□□□□ -2.46
IFT140Q96RY7 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC-0.3□□□□□ -2.46
IFT140Q96RY7 MIR4753-201ENST00000585119 83 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 uc_338.6-201ENST00000613544 171 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC-0.3□□□□□ -2.46
IFT140Q96RY7 AP000568.1-201ENST00000282964 442 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 SNORD114-5-201ENST00000362928 70 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 MIR1283-1-201ENST00000408494 87 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 MIR1827-201ENST00000408549 66 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 ZFAND6P1-201ENST00000434138 605 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 AC243964.1-201ENST00000441814 261 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 AC093019.1-201ENST00000443135 252 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 ZNF736P5Y-201ENST00000451173 805 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC-0.31□□□□□ -2.46
IFT140Q96RY7 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC-0.31□□□□□ -2.46
IFT140Q96RY7 AL049829.1-201ENST00000465411 156 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 RNU6-1069P-201ENST00000516612 133 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 LRRC6P1-201ENST00000532188 885 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.31□□□□□ -2.46
IFT140Q96RY7 MTND3P19-201ENST00000603825 345 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 MIR8084-201ENST00000614105 89 ntBASIC-0.31□□□□□ -2.46
IFT140Q96RY7 MIR18A-201ENST00000362310 71 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 MIR644A-201ENST00000385262 94 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 SNORD111-201ENST00000408139 94 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 SEPT7P4-201ENST00000437076 306 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 MTCO2P7-201ENST00000446518 666 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AC016717.1-201ENST00000448918 286 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 TPT1P7-201ENST00000458300 517 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AC116347.2-201ENST00000514912 523 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AC112206.4-201ENST00000515142 405 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AF235103.2-201ENST00000525753 346 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 MIR3192-201ENST00000584920 77 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AC064807.4-201ENST00000607201 407 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 AL359547.2-201ENST00000615810 418 ntBASIC-0.32□□□□□ -2.46
IFT140Q96RY7 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 Y_RNA.571-201ENST00000384753 98 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 MIR573-201ENST00000384964 99 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 RNU6-57P-201ENST00000411348 103 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 CDK8P2-201ENST00000415020 547 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 AC078809.1-201ENST00000427601 140 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 HSFY7P-201ENST00000432672 318 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 HSFY8P-201ENST00000437934 318 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 EEF1A1P39-201ENST00000440791 250 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.33□□□□□ -2.46
IFT140Q96RY7 MTCO1P27-201ENST00000448269 226 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.33□□□□□ -2.46
IFT140Q96RY7 RNU6-863P-201ENST00000515989 104 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 AC026616.1-201ENST00000523157 525 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 AC104458.1-201ENST00000608243 463 ntBASIC-0.33□□□□□ -2.46
IFT140Q96RY7 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-0.34□□□□□ -2.46
IFT140Q96RY7 MIR1-1-201ENST00000362147 71 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 MIR578-201ENST00000384828 96 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 RNU6-679P-201ENST00000391003 106 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 AL158053.1-201ENST00000441503 453 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 SNORA40.12-201ENST00000516329 111 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 SNORD111.1-201ENST00000516421 86 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 AC112693.2-201ENST00000556538 232 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 U4.7-201ENST00000638126 106 ntBASIC-0.34□□□□□ -2.46
IFT140Q96RY7 SNORD114-28-201ENST00000363610 72 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 RNU6-960P-201ENST00000364056 120 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 RNA5SP517-201ENST00000364724 117 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 Y_RNA.488-201ENST00000384403 102 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 RN7SKP142-201ENST00000411236 328 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 RNU6-293P-201ENST00000411259 106 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC-0.35□□□□□ -2.46
IFT140Q96RY7 MTCYBP42-201ENST00000444653 1130 ntBASIC-0.35□□□□□ -2.46
IFT140Q96RY7 AC079382.1-201ENST00000493346 557 ntBASIC-0.35□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms