Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 SNORA25-201ENST00000384384 134 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 RNA5SP109-201ENST00000391010 116 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 RNA5SP323-201ENST00000391094 133 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 MTATP6P18-201ENST00000417994 673 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 MTCYBP8-201ENST00000422855 651 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 MTCO2P11-201ENST00000431069 680 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 MTND4P32-201ENST00000437189 1237 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AC025465.4-201ENST00000513422 638 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 RN7SKP287-201ENST00000516546 266 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 MIR4742-201ENST00000581069 85 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AL078603.1-201ENST00000603824 313 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AC093424.1-201ENST00000604999 338 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 BX284668.6-201ENST00000606899 438 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AC072046.2-201ENST00000618366 268 ntBASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC0.96□□□□□ -2.26
C9orf72Q96LT7 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNU6-1123P-201ENST00000362347 106 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNU6-1305P-201ENST00000364353 104 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNU6-968P-201ENST00000384076 107 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 MIR515-2-201ENST00000384883 83 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 MIR515-1-201ENST00000384884 83 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNA5SP219-201ENST00000390940 113 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 MIR1253-201ENST00000408273 105 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 MTCO3P8-201ENST00000453691 755 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RPS29P1-201ENST00000465274 159 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 RNU6-1069P-201ENST00000516612 133 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 MTND1P24-201ENST00000552175 861 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AL929325.1-201ENST00000603096 117 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 uc_338.34-201ENST00000617467 174 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AC009509.4-201ENST00000619202 509 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 AC091931.1-201ENST00000623488 728 ntBASIC0.95□□□□□ -2.26
C9orf72Q96LT7 UGP2-230ENST00000626380 276 ntTSL 5 BASIC0.95□□□□□ -2.26
C9orf72Q96LT7 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RNU5B-2P-201ENST00000363036 113 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 Y_RNA.118-201ENST00000363300 101 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RNA5SP467-201ENST00000391274 118 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC004866.1-201ENST00000411748 78 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC009237.7-201ENST00000447357 229 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 MTND1P27-201ENST00000451117 902 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RNU7-63P-201ENST00000459054 62 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RNU7-180P-201ENST00000459240 63 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RPS29P27-201ENST00000463711 170 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 RNA5SP220-201ENST00000516298 104 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 MTND4P7-201ENST00000523876 130 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 MDM2-233ENST00000545204 398 ntTSL 5 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC011604.1-201ENST00000545978 196 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC068790.2-201ENST00000602601 557 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AL022345.2-201ENST00000606307 135 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 AC012676.2-201ENST00000619258 186 ntBASIC0.94□□□□□ -2.26
C9orf72Q96LT7 Y_RNA.287-201ENST00000364853 94 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 RNU6-42P-201ENST00000384165 107 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 RNU6-57P-201ENST00000411348 103 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC010154.1-201ENST00000425857 269 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC074290.1-201ENST00000448883 135 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 snoU13.18-201ENST00000459483 104 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 RNU7-57P-201ENST00000459540 60 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 UBL5P1-201ENST00000507979 193 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC010493.1-201ENST00000513479 292 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.93□□□□□ -2.26
C9orf72Q96LT7 TPRKBP2-201ENST00000565969 475 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC097065.2-201ENST00000608159 533 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC021506.2-201ENST00000612354 169 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 HULC.1-201ENST00000612720 240 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 MIR7111-201ENST00000619751 72 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 AC027335.2-201ENST00000624030 375 ntBASIC0.93□□□□□ -2.26
C9orf72Q96LT7 Y_RNA.123-201ENST00000363338 102 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 MIR532-201ENST00000385025 91 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
C9orf72Q96LT7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC0.92□□□□□ -2.26
C9orf72Q96LT7 RPS27P1-201ENST00000450552 247 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 U8.21-201ENST00000459536 136 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 CCDC34P1-201ENST00000507441 517 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 SNORA14.1-201ENST00000516113 141 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 CYCSP23-201ENST00000519781 313 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 AC024995.1-201ENST00000523014 93 ntBASIC0.92□□□□□ -2.26
C9orf72Q96LT7 AC104576.1-201ENST00000524225 88 ntBASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms