Protein–RNA interactions for Protein: Q96DD7

SHISA4, Protein shisa-4, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4Q96DD7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
SHISA4Q96DD7 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 Y_RNA.586-201ENST00000391146 98 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AP000567.1-201ENST00000406413 156 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AC019205.3-201ENST00000424573 156 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 VDAC1P3-201ENST00000434069 851 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 EEF1B2P7-201ENST00000451177 676 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 RPL30P12-201ENST00000474666 353 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AC115990.1-201ENST00000526957 301 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AC009127.3-201ENST00000570531 403 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 DEFB117-201ENST00000602356 141 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AC006380.1-201ENST00000603598 186 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 MIR3674-201ENST00000636576 68 ntBASIC3.53□□□□□ -1.84
SHISA4Q96DD7 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SHISA4Q96DD7 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 ADAM3A-203ENST00000461344 2157 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 MIR148B-201ENST00000362252 99 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 RNU1-62P-201ENST00000362599 164 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.412-201ENST00000384001 104 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 RNU6-1199P-201ENST00000411249 104 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.629-201ENST00000411368 105 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 ELOCP21-201ENST00000412558 336 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC009963.1-201ENST00000417265 157 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC245291.1-201ENST00000419501 328 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 SEPT7P4-201ENST00000437076 306 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 RPS20P10-201ENST00000451209 253 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AP002884.2-201ENST00000471647 395 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 RPS27AP10-201ENST00000496103 208 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 RNU6-581P-201ENST00000516214 105 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 MIR4524B-201ENST00000581569 115 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.778-201ENST00000620203 90 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC091152.2-201ENST00000591628 2569 ntBASIC3.52□□□□□ -1.85
SHISA4Q96DD7 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC3.52□□□□□ -1.85
SHISA4Q96DD7 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 RNU6-151P-201ENST00000364158 107 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 RNU6-487P-201ENST00000365430 104 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 MIR186-201ENST00000384988 86 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 RNA5SP508-201ENST00000411327 119 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 HMGN2P10-201ENST00000448085 265 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 AC091179.3-201ENST00000474761 144 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 SNORD116-25-201ENST00000516517 92 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 RNA5SP468-201ENST00000516782 93 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 MIR5047-201ENST00000579212 100 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 AC090897.2-201ENST00000581715 130 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 SNRPGP20-201ENST00000604477 205 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 AL365222.1-201ENST00000614661 98 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 MIR622-201ENST00000638396 96 ntBASIC3.51□□□□□ -1.85
SHISA4Q96DD7 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.51□□□□□ -1.85
SHISA4Q96DD7 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 RNU6-239P-201ENST00000390990 99 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC099548.1-201ENST00000421443 426 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC008267.6-201ENST00000441664 139 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC090525.1-201ENST00000479116 478 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC010409.1-201ENST00000487382 476 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 Y_RNA.797-201ENST00000515977 94 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC021739.1-201ENST00000559631 174 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 CYP4A27P-201ENST00000567218 190 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 AC093831.2-201ENST00000624393 3427 ntBASIC3.5□□□□□ -1.85
SHISA4Q96DD7 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC3.5□□□□□ -1.85
SHISA4Q96DD7 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 AC002543.1-201ENST00000299783 1954 ntBASIC3.49□□□□□ -1.85
SHISA4Q96DD7 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SHISA4Q96DD7 RNA5SP383-201ENST00000362934 120 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 164.2 ms