Protein–RNA interactions for Protein: Q96CB9

NSUN4, 5-methylcytosine rRNA methyltransferase NSUN4, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSUN4Q96CB9 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.11□□□□□ -2.07
NSUN4Q96CB9 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
NSUN4Q96CB9 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.11□□□□□ -2.07
NSUN4Q96CB9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.11□□□□□ -2.07
NSUN4Q96CB9 Y_RNA.72-201ENST00000362894 103 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 SNORA8-201ENST00000384574 139 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MIR153-2-201ENST00000385225 87 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MIR676-201ENST00000390702 67 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MIR1283-1-201ENST00000408494 87 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MTND1P2-201ENST00000430604 821 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AC009237.7-201ENST00000447357 229 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MTND1P17-201ENST00000448961 204 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 RNU6-329P-201ENST00000459618 107 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AC018710.1-201ENST00000506509 158 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 MRPS17P9-201ENST00000511924 393 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AL109918.3-201ENST00000603072 338 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 AC083806.3-201ENST00000614016 455 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 ZNF204P-201ENST00000416749 2397 ntBASIC2.1□□□□□ -2.07
NSUN4Q96CB9 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
NSUN4Q96CB9 SNORD115-32-201ENST00000364079 82 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 Y_RNA.301-201ENST00000364990 103 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
NSUN4Q96CB9 SNORA12.2-201ENST00000391040 156 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AL356776.1-201ENST00000406574 447 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.09□□□□□ -2.07
NSUN4Q96CB9 MTCO3P8-201ENST00000453691 755 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 snoU13.30-201ENST00000458951 104 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC2.09□□□□□ -2.07
NSUN4Q96CB9 DEFB131C-201ENST00000528817 165 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AC005668.1-201ENST00000571142 476 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 MIR4419B-201ENST00000577260 68 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AP000942.3-201ENST00000603702 160 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AC091932.3-201ENST00000624223 323 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 AL159152.1-201ENST00000635019 2587 ntBASIC2.09□□□□□ -2.07
NSUN4Q96CB9 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
NSUN4Q96CB9 AL359851.1-201ENST00000569460 4997 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 BX322639.1-202ENST00000423987 2213 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 MIR549A-201ENST00000385268 96 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 SNORA48.1-201ENST00000390879 135 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AL033519.2-201ENST00000403958 392 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 RNU6ATAC15P-201ENST00000408279 121 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 MTND3P8-201ENST00000412909 339 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AL357134.1-201ENST00000445848 426 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 FO393415.2-201ENST00000480085 343 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 RNA5SP458-201ENST00000516188 119 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 MIR4742-201ENST00000581069 85 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC2.08□□□□□ -2.08
NSUN4Q96CB9 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
NSUN4Q96CB9 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 RNU6-457P-201ENST00000363999 107 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 RNU6-596P-201ENST00000365395 98 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
NSUN4Q96CB9 RNA5SP489-201ENST00000410986 109 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.07□□□□□ -2.08
NSUN4Q96CB9 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 NCOR1P3-201ENST00000420479 303 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 AC010531.2-201ENST00000465012 153 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 RNU7-175P-201ENST00000515915 61 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 RRN3P3-201ENST00000549207 578 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 MIR3935-201ENST00000583472 104 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.07□□□□□ -2.08
NSUN4Q96CB9 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
NSUN4Q96CB9 CASC19-280ENST00000642102 1351 ntBASIC2.07□□□□□ -2.08
NSUN4Q96CB9 ZNF299P-201ENST00000406845 1804 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 RNU5F-3P-201ENST00000363767 117 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 RNU6-1305P-201ENST00000364353 104 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 Y_RNA.319-201ENST00000365138 92 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 RNU6-245P-201ENST00000384020 107 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 U8.10-201ENST00000384260 133 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 SUMO2P12-201ENST00000405924 140 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AC074085.1-201ENST00000413598 418 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AC108667.1-201ENST00000428618 249 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 Z82188.1-201ENST00000436709 154 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AC107399.1-201ENST00000451226 265 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AC097473.1-201ENST00000508142 408 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 RNU6-948P-201ENST00000516374 107 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 RNU2-34P-201ENST00000516534 121 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.06□□□□□ -2.08
NSUN4Q96CB9 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.06□□□□□ -2.08
NSUN4Q96CB9 AL096840.1-201ENST00000603287 93 ntBASIC2.06□□□□□ -2.08
NSUN4Q96CB9 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2.06□□□□□ -2.08
NSUN4Q96CB9 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
NSUN4Q96CB9 Y_RNA.140-201ENST00000363474 103 ntBASIC2.05□□□□□ -2.08
NSUN4Q96CB9 RNU6-418P-201ENST00000384035 107 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 121.2 ms