Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 RNU6-329P-201ENST00000459618 107 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 RPL30P10-201ENST00000488148 337 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.82□□□□□ -2.12
VPS33AQ96AX1 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC116337.1-201ENST00000509680 687 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.82□□□□□ -2.12
VPS33AQ96AX1 MIR4790-201ENST00000577799 79 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 AC060780.3-201ENST00000589464 80 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 BNIP3P10-201ENST00000605360 577 ntBASIC1.82□□□□□ -2.12
VPS33AQ96AX1 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
VPS33AQ96AX1 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 Y_RNA.86-201ENST00000363020 111 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AL356776.1-201ENST00000406574 447 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AL135786.1-201ENST00000415892 214 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC016717.1-201ENST00000448918 286 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 HMGN2P23-201ENST00000456759 269 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 SNORD5.1-201ENST00000458800 75 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 FO393415.2-201ENST00000480085 343 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC027575.1-201ENST00000481064 460 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC025465.3-201ENST00000510570 311 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 RNU6-1146P-201ENST00000516282 102 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 RNA5SP384-201ENST00000516615 116 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 MIR1273D-201ENST00000577266 86 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC013412.1-201ENST00000610687 192 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 IGHVIII-44-202ENST00000636235 289 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 MIR219B-201ENST00000637023 88 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.81□□□□□ -2.12
VPS33AQ96AX1 WWP1P1-201ENST00000466609 2769 ntBASIC1.81□□□□□ -2.12
VPS33AQ96AX1 AC010615.1-201ENST00000594254 1764 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC245060.5-201ENST00000610778 3293 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 RNU6-280P-201ENST00000364145 104 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 RNU6-541P-201ENST00000384709 110 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR515-2-201ENST00000384883 83 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR515-1-201ENST00000384884 83 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR934-201ENST00000401241 83 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC245047.4-201ENST00000433189 144 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 HSPE1P21-201ENST00000438283 308 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC096638.1-201ENST00000444678 216 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.8□□□□□ -2.12
VPS33AQ96AX1 NDUFB4P10-201ENST00000452541 359 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 RNU7-57P-201ENST00000459540 60 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 RNU7-175P-201ENST00000515915 61 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC134698.4-201ENST00000523451 826 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AL590705.4-201ENST00000532209 134 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC104581.2-201ENST00000572227 430 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR8074-201ENST00000615081 81 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR6128-201ENST00000615528 109 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 MIR338-201ENST00000636369 67 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 AC068205.3-201ENST00000636385 468 ntBASIC1.8□□□□□ -2.12
VPS33AQ96AX1 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.8□□□□□ -2.12
VPS33AQ96AX1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS33AQ96AX1 snoU2-30.2-201ENST00000362805 70 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 Y_RNA.72-201ENST00000362894 103 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 RNU6-595P-201ENST00000363944 107 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 RNU6-593P-201ENST00000364716 112 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SNORA72.2-201ENST00000365028 127 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 Y_RNA.533-201ENST00000384596 114 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 RNU6-159P-201ENST00000391080 106 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SNORA3.2-201ENST00000408221 125 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 RN7SKP223-201ENST00000410582 62 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 Z98742.3-201ENST00000418637 326 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 USP9YP30-201ENST00000430729 455 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 MTCO3P29-201ENST00000432119 779 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 MTND5P5-201ENST00000503764 376 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SNORA25.14-201ENST00000516481 132 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 RNU6-358P-201ENST00000516564 75 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.79□□□□□ -2.12
VPS33AQ96AX1 MIR4742-201ENST00000581069 85 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 AL158827.2-201ENST00000602494 330 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 AC098679.4-201ENST00000624241 654 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 snoZ196.1-201ENST00000625269 89 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 AL691447.3-201ENST00000635020 330 ntBASIC1.79□□□□□ -2.12
VPS33AQ96AX1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
VPS33AQ96AX1 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS33AQ96AX1 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
VPS33AQ96AX1 RNU6-873P-201ENST00000363833 107 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 SNORA63D-201ENST00000364359 132 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 SNORA16.1-201ENST00000364597 132 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
VPS33AQ96AX1 RNA5SP504-201ENST00000410676 117 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 MTND3P8-201ENST00000412909 339 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AC008134.1-201ENST00000420943 193 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.78□□□□□ -2.12
VPS33AQ96AX1 USMG5P1-201ENST00000425964 177 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 FTH1P12-201ENST00000432137 551 ntBASIC1.78□□□□□ -2.12
VPS33AQ96AX1 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC1.78□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 168 ms