Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNU6-470P-201ENST00000515954 104 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 RNA5SP364-201ENST00000516938 78 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 CBX3P8-201ENST00000532412 525 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 uc_338.20-201ENST00000621563 178 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
RFT1Q96AA3 AC008555.8-201ENST00000623602 2168 ntBASIC1.93□□□□□ -2.1
RFT1Q96AA3 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-743P-201ENST00000364151 106 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNY3P11-201ENST00000364153 102 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-1164P-201ENST00000364428 107 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 SNORA29-201ENST00000384183 140 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-784P-201ENST00000384330 106 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 MIR1283-2-201ENST00000408621 87 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 USMG5P1-201ENST00000425964 177 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 AL353997.1-201ENST00000432936 108 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AC018634.1-201ENST00000437554 401 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 MTND2P29-201ENST00000438595 412 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 AL035666.1-201ENST00000446195 348 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AC105758.1-201ENST00000506038 399 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 MIR449C-201ENST00000516047 92 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RNU6-991P-201ENST00000516168 107 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 MIR4287-201ENST00000579398 78 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 MIR4680-201ENST00000580906 66 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 RPL17P51-201ENST00000605218 238 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AL162730.1-201ENST00000605734 292 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 PISRT1.1-201ENST00000616930 107 ntBASIC1.92□□□□□ -2.1
RFT1Q96AA3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
RFT1Q96AA3 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNA5SP289-201ENST00000362332 137 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 SNORD50.1-201ENST00000362987 71 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 Y_RNA.202-201ENST00000364083 110 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNU6-933P-201ENST00000384424 107 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNU6-790P-201ENST00000384479 105 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 MIR221-201ENST00000385135 110 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNA5SP465-201ENST00000391195 109 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 Y_RNA.645-201ENST00000391229 102 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 MIR208B-201ENST00000401172 77 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AL512604.1-201ENST00000404812 257 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNU6-1045P-201ENST00000516321 107 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 RNA5SP281-201ENST00000516504 135 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 HSPE1P18-201ENST00000517602 280 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 MIR5007-201ENST00000583098 95 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AL096840.1-201ENST00000603287 93 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 SNORD58B-201ENST00000607313 66 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AL355802.3-201ENST00000607571 545 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.91□□□□□ -2.1
RFT1Q96AA3 AC009487.4-201ENST00000624969 3585 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 ZNF72P-201ENST00000425869 1908 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 AL136360.1-201ENST00000503377 1900 ntBASIC1.91□□□□□ -2.1
RFT1Q96AA3 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.9□□□□□ -2.1
RFT1Q96AA3 RNU1-76P-201ENST00000362903 159 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 Y_RNA.252-201ENST00000364556 101 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 RNU6-968P-201ENST00000384076 107 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 SNORA67.4-201ENST00000384688 142 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.9□□□□□ -2.11
RFT1Q96AA3 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.9□□□□□ -2.11
RFT1Q96AA3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.9□□□□□ -2.11
RFT1Q96AA3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.9□□□□□ -2.11
RFT1Q96AA3 RNU6-976P-201ENST00000516086 111 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 RNU2-44P-201ENST00000516795 194 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 RNA5SP490-201ENST00000517141 136 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.9□□□□□ -2.11
RFT1Q96AA3 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 AL627230.6-201ENST00000611129 280 ntBASIC1.9□□□□□ -2.11
RFT1Q96AA3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.89□□□□□ -2.11
RFT1Q96AA3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
RFT1Q96AA3 RNU6-874P-201ENST00000362390 105 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 RNU6-99P-201ENST00000364721 107 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 RNU6-574P-201ENST00000384265 107 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 Y_RNA.527-201ENST00000384573 102 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 MIR521-1-201ENST00000384902 87 ntBASIC1.89□□□□□ -2.11
RFT1Q96AA3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
RFT1Q96AA3 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms