Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF4Q92544 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.2□□□□□ -2.06
TM9SF4Q92544 RNU7-87P-201ENST00000459343 62 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 RPL22P13-201ENST00000493291 347 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 RNA5SP281-201ENST00000516504 135 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 Y_RNA.706-201ENST00000516933 99 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 IGLV3-17-201ENST00000519099 244 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 UBL5P4-201ENST00000562584 236 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 AC023824.2-201ENST00000566185 400 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 PART1_1.1-201ENST00000611761 217 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 RMST_6.1-201ENST00000611980 203 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.2□□□□□ -2.06
TM9SF4Q92544 AC016717.2-201ENST00000609089 5141 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 MTND5P16-201ENST00000460269 1703 ntBASIC2.2□□□□□ -2.06
TM9SF4Q92544 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF4Q92544 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF4Q92544 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNU1-51P-201ENST00000365345 176 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNU1-52P-201ENST00000384190 164 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNU6-378P-201ENST00000384324 107 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 Y_RNA.557-201ENST00000384680 107 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 MIR218-1-201ENST00000384999 110 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNA5SP201-201ENST00000410316 124 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 Y_RNA.605-201ENST00000410577 105 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TM9SF4Q92544 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 AC096638.1-201ENST00000444678 216 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 RNA5SP112-201ENST00000515937 99 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 MIR3136-201ENST00000583498 78 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 AL132822.1-201ENST00000617063 513 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 U2.1-201ENST00000618978 145 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 AL162373.1-201ENST00000620433 407 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 AC080128.1-201ENST00000474389 1917 ntBASIC2.19□□□□□ -2.06
TM9SF4Q92544 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.19□□□□□ -2.06
TM9SF4Q92544 Y_RNA.319-201ENST00000365138 92 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 RNU6-26P-201ENST00000383985 107 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 Y_RNA.422-201ENST00000384054 114 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 MIR153-2-201ENST00000385225 87 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 RNA5SP213-201ENST00000391031 106 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 CBX3P9-201ENST00000402326 552 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 AC011753.1-201ENST00000451001 220 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 AL139109.1-201ENST00000455491 297 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 AC140059.1-201ENST00000489238 361 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 GNAI2P1-201ENST00000541815 315 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 HSBP1P1-201ENST00000555205 166 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 DEFB122-202ENST00000569013 197 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 MIR3199-1-201ENST00000582434 88 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 RPL30P11-203ENST00000598995 310 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 AC008737.2-201ENST00000599446 118 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 AL449363.1-201ENST00000617815 186 ntBASIC2.18□□□□□ -2.06
TM9SF4Q92544 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TM9SF4Q92544 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF4Q92544 RNU6-486P-201ENST00000363116 107 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 Y_RNA.153-201ENST00000363615 91 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 RNU6-823P-201ENST00000391042 103 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 SNORA46.1-201ENST00000391069 153 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 SNORA12-201ENST00000391162 147 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 MIR208B-201ENST00000401172 77 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 RNU6-985P-201ENST00000410182 104 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 RPS26P42-201ENST00000413485 326 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 AL590556.1-201ENST00000423231 483 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 MICF-203ENST00000432679 129 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC107032.1-201ENST00000485945 480 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC132942.1-201ENST00000486753 483 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC145146.1-201ENST00000496370 254 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 RNU6-475P-201ENST00000516073 104 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 RNU6-1045P-201ENST00000516321 107 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 HSPE1P18-201ENST00000517602 280 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC144568.1-201ENST00000520139 137 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 CYP4A27P-201ENST00000567218 190 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC113195.1-201ENST00000579952 141 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 MIR5694-201ENST00000581190 76 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC125232.2-201ENST00000592457 143 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 VN1R91P-201ENST00000594377 169 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 7SK.7-201ENST00000603504 247 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AL713866.2-201ENST00000603579 219 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 AC016727.2-201ENST00000603988 621 ntBASIC2.17□□□□□ -2.06
TM9SF4Q92544 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.17□□□□□ -2.06
TM9SF4Q92544 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.17□□□□□ -2.06
TM9SF4Q92544 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 130.9 ms