Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR300-201ENST00000401138 83 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AL133396.1-201ENST00000432048 687 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 COX7BP2-201ENST00000437976 242 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AL118556.2-201ENST00000614375 824 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 RNU6-78P-201ENST00000362897 107 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 SNORA72.1-201ENST00000363485 129 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.428-201ENST00000384078 102 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 RNA5SP467-201ENST00000391274 118 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 SNORA26-201ENST00000391286 122 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 RNU6-953P-201ENST00000459154 107 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 RBM11P1-201ENST00000604951 799 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AL513423.1-201ENST00000621695 132 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AC090617.9-201ENST00000623751 147 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 SNORA63D-201ENST00000364359 132 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.287-201ENST00000364853 94 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 MIR760-201ENST00000390220 80 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AC016909.1-201ENST00000415916 166 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 MTCO3P1-205ENST00000422088 832 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 AL365338.1-201ENST00000422282 858 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 UBE2D3P3-201ENST00000426992 425 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 MTCO1P31-201ENST00000506355 492 ntBASIC-0.27□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 SNORA8.2-201ENST00000384372 139 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 C1DP2-201ENST00000418167 426 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 USP9YP11-201ENST00000427537 717 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 C1DP4-201ENST00000455429 424 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC010531.2-201ENST00000465012 153 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC114811.1-201ENST00000507207 168 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-977P-201ENST00000516411 103 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 MTCO3P15-201ENST00000526563 574 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC122134.1-202ENST00000569111 1201 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC080078.2-201ENST00000603766 501 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC006504.8-201ENST00000621046 635 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 snoU2-30.2-201ENST00000362805 70 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 SNORD32A-201ENST00000364805 84 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC244670.1-201ENST00000436879 112 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 MTND4LP26-201ENST00000518144 282 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC090049.2-201ENST00000550377 109 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC012507.3-201ENST00000603556 477 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AP000484.1-201ENST00000620067 1252 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 Y_RNA.423-201ENST00000384057 113 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-284P-201ENST00000411105 106 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 DEFB130D-201ENST00000426866 237 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 snoU109.2-201ENST00000459316 135 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-848P-201ENST00000515948 107 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-617P-201ENST00000516147 107 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-473P-201ENST00000516164 107 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 MIR4637-201ENST00000582405 84 ntBASIC-0.28□□□□□ -2.45
ALMS1Q8TCU4 BX322639.1-202ENST00000423987 2213 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 SNORA12.2-201ENST00000391040 156 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC079354.2-201ENST00000453523 154 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNU7-14P-201ENST00000459331 62 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNU6-856P-201ENST00000516959 98 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 SNORA31.19-201ENST00000517079 126 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC009902.1-201ENST00000519351 183 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RPL23AP91-201ENST00000569211 455 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 MIR4324-201ENST00000584846 72 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AL596327.1-201ENST00000603629 213 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 MIR573-201ENST00000384964 99 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC106883.1-201ENST00000418805 562 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 USP9YP14-201ENST00000430663 563 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC007215.1-201ENST00000464893 276 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNA5SP94-201ENST00000516917 108 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 Y_RNA.711-201ENST00000516993 102 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC023827.1-201ENST00000569247 97 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC092447.9-201ENST00000603395 144 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNU6-94P-201ENST00000607728 107 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 MIR6738-201ENST00000619620 64 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AC093809.1-201ENST00000509155 340 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNU6-914P-201ENST00000516749 109 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 MRPS36P4-201ENST00000534436 298 ntBASIC-0.29□□□□□ -2.46
ALMS1Q8TCU4 RNU6-839P-201ENST00000363347 108 ntBASIC-0.3□□□□□ -2.46
ALMS1Q8TCU4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.3□□□□□ -2.46
ALMS1Q8TCU4 MIR891A-201ENST00000401237 79 ntBASIC-0.3□□□□□ -2.46
ALMS1Q8TCU4 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC-0.3□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 117.7 ms