Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 AC245297.2-201ENST00000610119 565 ntBASIC-0.39□□□□□ -2.47
SPTSSBQ8NFR3 U8.7-201ENST00000364940 136 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 RPL17P50-201ENST00000396131 546 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC008628.2-201ENST00000502605 298 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-377P-201ENST00000515965 102 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 RNU6-123P-201ENST00000516163 102 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 RNA5SP220-201ENST00000516298 104 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 RNU11-2P-201ENST00000516898 142 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC025647.1-201ENST00000517879 253 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 AC112191.3-201ENST00000604371 277 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 SNORA25.18-201ENST00000607153 114 ntBASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC-0.4□□□□□ -2.47
SPTSSBQ8NFR3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.41□□□□□ -2.47
SPTSSBQ8NFR3 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 RNA5SP128-201ENST00000365305 116 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 RNU6-1297P-201ENST00000384415 104 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 MIR526A1-201ENST00000384897 85 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 SNORD83.1-201ENST00000411362 77 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AC090960.1-201ENST00000421072 306 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 CALM2P2-201ENST00000428512 440 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 MRPS10P2-201ENST00000431226 381 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 RNU7-99P-201ENST00000516271 62 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 RNA5SP94-201ENST00000516917 108 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 RNU1-117P-201ENST00000517041 158 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 MIR4743-201ENST00000584576 69 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AC073539.2-201ENST00000597113 165 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 MTATP6P2-201ENST00000603319 678 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AL139286.2-201ENST00000606838 396 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AP002360.4-201ENST00000606980 481 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AC007684.1-201ENST00000609671 477 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 SNORA43.4-201ENST00000629559 138 ntBASIC-0.41□□□□□ -2.48
SPTSSBQ8NFR3 AL445523.1-201ENST00000451184 1362 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 MIR145-201ENST00000384967 88 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 MIR586-201ENST00000385035 97 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC008134.1-201ENST00000420943 193 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC012306.1-201ENST00000423267 114 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AL590632.1-201ENST00000424289 371 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 ZNF736P7Y-201ENST00000425158 820 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 USP9YP29-201ENST00000445112 563 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 NDUFA4P2-201ENST00000489989 244 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 MTND3P25-201ENST00000509243 135 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC117522.1-201ENST00000509821 380 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC079395.1-201ENST00000510981 262 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 RNU4-77P-201ENST00000516692 156 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 MIR5692A1-201ENST00000580523 69 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC010620.1-201ENST00000601088 1102 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC112187.2-201ENST00000604345 283 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AL158032.1-201ENST00000605401 106 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 RNU4-5P-201ENST00000607255 135 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 AC005562.2-201ENST00000618264 111 ntBASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 UGP2-230ENST00000626380 276 ntTSL 5 BASIC-0.42□□□□□ -2.48
SPTSSBQ8NFR3 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 SNORA25.3-201ENST00000363205 127 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 SNORA25.9-201ENST00000365087 128 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 SNORA36A-201ENST00000384221 132 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 MIR610-201ENST00000385139 96 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 RNU1-139P-201ENST00000391307 165 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 SNORA75.6-201ENST00000391318 127 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 TRIM60P10Y-201ENST00000425589 751 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 MED13P1-201ENST00000428342 171 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 AL117351.1-201ENST00000438864 766 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 AC109479.2-201ENST00000517842 174 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 MIR544B-201ENST00000582372 78 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 BNIP3P26-201ENST00000600827 554 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 U6.73-201ENST00000619194 103 ntBASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.43□□□□□ -2.48
SPTSSBQ8NFR3 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 MIRLET7C-201ENST00000362160 84 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 SNORA9.1-201ENST00000362412 131 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 RNU5B-4P-201ENST00000363508 111 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 RNU6-1240P-201ENST00000365155 104 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 SNORA8.2-201ENST00000384372 139 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 MIR520G-201ENST00000385064 90 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 MIR520H-201ENST00000385126 88 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 AL392103.1-201ENST00000447000 198 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 AC074290.1-201ENST00000448883 135 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 RNU6-221P-201ENST00000459541 99 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 AC091874.1-201ENST00000511402 339 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 MTCO3P27-201ENST00000514397 196 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.44□□□□□ -2.48
SPTSSBQ8NFR3 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.44□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 185 ms