Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 RNU4-45P-201ENST00000365469 141 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.367-201ENST00000365544 101 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORA36A-201ENST00000384221 132 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR19A-201ENST00000384878 82 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD115.1-201ENST00000391109 76 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RPS3AP1-201ENST00000413190 320 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL161935.2-201ENST00000414627 60 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 ARL5AP1-201ENST00000418991 388 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL359672.1-201ENST00000442302 409 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC011406.1-201ENST00000512440 370 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC091805.2-201ENST00000603848 235 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC245047.4-201ENST00000433189 144 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RPL39P39-201ENST00000455840 151 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 BET1P1-201ENST00000482276 359 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 MIR3941-201ENST00000582572 103 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC105148.1-201ENST00000604961 409 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AL136221.1-201ENST00000621449 509 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC120349.3-201ENST00000624377 529 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU4-79P-201ENST00000362764 141 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.265-201ENST00000364677 108 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD114-24-201ENST00000365029 72 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 SNORD89-201ENST00000390981 114 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.11□□□□□ -2.39
SYNE1Q8NF91 IGKV1-22-201ENST00000524313 326 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 AP002360.4-201ENST00000606980 481 ntBASIC0.11□□□□□ -2.39
SYNE1Q8NF91 RNU6-1286P-201ENST00000383871 107 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MIR653-201ENST00000385279 96 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU1-119P-201ENST00000391122 165 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL512286.1-201ENST00000439244 400 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 DAP3P1-201ENST00000441522 278 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC113410.1-201ENST00000505029 247 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MTCO3P7-201ENST00000510008 774 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC116353.3-201ENST00000511215 249 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AP003465.2-201ENST00000602571 373 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC080013.3-201ENST00000606839 578 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL365434.2-201ENST00000607979 234 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC131159.1-201ENST00000621854 213 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MTCO1P17-201ENST00000411522 491 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC074290.1-201ENST00000448883 135 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU7-34P-201ENST00000459394 64 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RPL23AP54-201ENST00000495129 419 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORA62.5-201ENST00000516634 120 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-344P-201ENST00000516635 111 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL607023.1-201ENST00000620045 248 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MTND5P42-201ENST00000637720 498 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-545P-201ENST00000362681 104 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNA5SP214-201ENST00000363378 118 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORD115-7-201ENST00000365306 82 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-641P-201ENST00000384006 107 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1067P-201ENST00000384752 107 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC011233.1-201ENST00000422812 283 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 snoU13.21-201ENST00000459368 105 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-221P-201ENST00000459541 99 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORA31.2-201ENST00000516019 134 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1041P-201ENST00000516254 102 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC025423.5-201ENST00000550230 219 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL391840.1-201ENST00000571144 367 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL031281.1-201ENST00000604049 488 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL121992.2-201ENST00000606262 256 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC002044.1-201ENST00000606707 158 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC104010.1-201ENST00000616889 150 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 Y_RNA.65-201ENST00000362846 100 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1285P-201ENST00000363480 105 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RAB28P5-201ENST00000427490 651 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORD79.1-201ENST00000516069 84 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 ZNF321P-202ENST00000550843 495 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MIR378F-201ENST00000578143 78 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC008521.1-201ENST00000587471 187 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC006386.1-201ENST00000619436 415 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC139792.3-201ENST00000623525 224 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 AC068700.1-201ENST00000565862 3754 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RNU6-1179P-201ENST00000384667 107 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MTCO2P12-201ENST00000427426 682 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 SNORD124-201ENST00000459577 104 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 MTCO3P38-201ENST00000468910 766 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 RBBP4P6-201ENST00000508098 202 ntBASIC0.1□□□□□ -2.39
SYNE1Q8NF91 PCMTD1P2-201ENST00000565017 355 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 365.8 ms