Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 MIR5701-1-201ENST00000585138 82 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC1.85□□□□□ -2.11
CCDC63Q8NA47 MIR5701-2-201ENST00000615634 82 ntBASIC1.85□□□□□ -2.11
CCDC63Q8NA47 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
CCDC63Q8NA47 RNA5SP363-201ENST00000365072 115 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.405-201ENST00000383979 100 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.451-201ENST00000384200 100 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 SNORA67.2-201ENST00000384300 149 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.474-201ENST00000384341 102 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 RNU6-1026P-201ENST00000384465 108 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.524-201ENST00000384564 100 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 Y_RNA.561-201ENST00000384694 100 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 MIR1283-1-201ENST00000408494 87 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AC244636.1-201ENST00000421152 228 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AL445646.1-201ENST00000431784 216 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AL445305.1-201ENST00000432577 575 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AC096638.1-201ENST00000444678 216 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 MIR4419B-201ENST00000577260 68 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 MIR1273D-201ENST00000577266 86 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 SNRPGP20-201ENST00000604477 205 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC63Q8NA47 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AC130454.1-201ENST00000622948 401 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 AL359757.2-201ENST00000624309 274 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 IGHVIII-44-202ENST00000636235 289 ntBASIC1.84□□□□□ -2.11
CCDC63Q8NA47 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC1.84□□□□□ -2.12
CCDC63Q8NA47 MTND4P12-201ENST00000498999 1377 ntBASIC1.84□□□□□ -2.12
CCDC63Q8NA47 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 Y_RNA.2-201ENST00000362330 96 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 SNORD48-201ENST00000364953 64 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 Y_RNA.490-201ENST00000384413 102 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RNA5SP504-201ENST00000410676 117 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RNA5SP501-201ENST00000410990 112 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RPS20P15-201ENST00000412792 311 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 HSPE1P21-201ENST00000438283 308 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RN7SKP210-201ENST00000459176 261 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RNA5SP54-201ENST00000516951 92 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RNU6-1213P-201ENST00000517075 94 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AP000889.1-201ENST00000530968 660 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RRN3P3-201ENST00000549207 578 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 UBL5P4-201ENST00000562584 236 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC022254.1-201ENST00000567857 235 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RBM11P1-201ENST00000604951 799 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC016727.1-205ENST00000605437 569 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 WT1-AS_8.1-201ENST00000615200 275 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 AC099654.5-201ENST00000636479 350 ntBASIC1.83□□□□□ -2.12
CCDC63Q8NA47 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC63Q8NA47 RNU6-873P-201ENST00000363833 107 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC63Q8NA47 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC63Q8NA47 RNU6-418P-201ENST00000384035 107 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 RNU6-331P-201ENST00000384724 107 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 RNU6-159P-201ENST00000391080 106 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 RNA5SP212-201ENST00000391223 107 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 MIR300-201ENST00000401138 83 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 AL033519.2-201ENST00000403958 392 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 AC007395.1-201ENST00000451333 677 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 AP000870.1-201ENST00000472927 406 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 HMGN2P9-201ENST00000476875 229 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.82□□□□□ -2.12
CCDC63Q8NA47 RNU7-175P-201ENST00000515915 61 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 AC105029.1-201ENST00000520250 669 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 MIR3618-201ENST00000580330 88 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 AL355802.3-201ENST00000607571 545 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 U1.36-201ENST00000620684 176 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 SCARNA15.3-201ENST00000626315 122 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 SCARNA4.1-201ENST00000628597 123 ntBASIC1.82□□□□□ -2.12
CCDC63Q8NA47 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CCDC63Q8NA47 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC63Q8NA47 SNORA72.1-201ENST00000363485 129 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 RNU6-137P-201ENST00000363680 108 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 RNU6-245P-201ENST00000384020 107 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 MIR10B-201ENST00000385011 110 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 SNORA75.4-201ENST00000391278 119 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CCDC63Q8NA47 MTND3P23-201ENST00000431980 347 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AL357134.1-201ENST00000445848 426 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AL049873.1-201ENST00000480540 376 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AC008549.1-201ENST00000512900 643 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 RNVU1-2-201ENST00000516326 135 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 RNU6-344P-201ENST00000516635 111 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AC134698.4-201ENST00000523451 826 ntBASIC1.81□□□□□ -2.12
CCDC63Q8NA47 AC005730.3-201ENST00000583067 366 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms