Protein–RNA interactions for Protein: Q8N8U3

RTL3, Retrotransposon Gag-like protein 3, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL3Q8N8U3 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.94□□□□□ -2.1
RTL3Q8N8U3 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.94□□□□□ -2.1
RTL3Q8N8U3 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.94□□□□□ -2.1
RTL3Q8N8U3 AL669831.3-213ENST00000636676 183 ntBASIC1.94□□□□□ -2.1
RTL3Q8N8U3 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.94□□□□□ -2.1
RTL3Q8N8U3 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.94□□□□□ -2.1
RTL3Q8N8U3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC009541.1-201ENST00000438279 2662 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.58-201ENST00000362807 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.67-201ENST00000362870 100 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNU5B-2P-201ENST00000363036 113 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNU6-23P-201ENST00000363283 107 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.123-201ENST00000363338 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.154-201ENST00000363624 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 SNORD32B-201ENST00000364460 84 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNY3P1-201ENST00000365085 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNY3-201ENST00000365484 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.473-201ENST00000384333 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.490-201ENST00000384413 102 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNU6-310P-201ENST00000384655 107 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 USMG5P1-201ENST00000425964 177 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 snoU13.15-201ENST00000459407 104 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RPL7P42-201ENST00000481005 679 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 MIR449C-201ENST00000516047 92 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 RNA5SP182-201ENST00000516064 82 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 ANP32BP3-201ENST00000559213 706 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC110588.1-201ENST00000559699 137 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 MIR3923-201ENST00000579521 83 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AL158827.2-201ENST00000602494 330 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AC025754.2-201ENST00000606491 432 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 AL691447.3-201ENST00000635020 330 ntBASIC1.93□□□□□ -2.1
RTL3Q8N8U3 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
RTL3Q8N8U3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
RTL3Q8N8U3 RNU6-1286P-201ENST00000383871 107 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 RNU6-26P-201ENST00000383985 107 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 SNORA12-201ENST00000391162 147 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AL033519.2-201ENST00000403958 392 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MIR1261-201ENST00000408659 82 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.646-201ENST00000410980 101 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 RNA5SP489-201ENST00000410986 109 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MTND4P28-201ENST00000426217 387 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MTCO3P10-201ENST00000455912 772 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AC097473.1-201ENST00000508142 408 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.92□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.675-201ENST00000516389 149 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 RNA5SP384-201ENST00000516615 116 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 RNU6-1213P-201ENST00000517075 94 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MIR5701-3-201ENST00000578890 82 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MIR5690-201ENST00000583739 73 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MIR5701-1-201ENST00000585138 82 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AL133255.1-201ENST00000606374 441 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AL050343.2-201ENST00000607338 280 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MIR5701-2-201ENST00000615634 82 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MTND4LP32-201ENST00000636111 270 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.92□□□□□ -2.1
RTL3Q8N8U3 MTND5P9-201ENST00000503854 1755 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AC245060.5-201ENST00000610778 3293 ntBASIC1.92□□□□□ -2.1
RTL3Q8N8U3 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 RNU6-595P-201ENST00000363944 107 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 Y_RNA.259-201ENST00000364619 101 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 SNORA75.6-201ENST00000391318 127 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 RNA5SP501-201ENST00000410990 112 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AL358453.1-201ENST00000422522 250 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AL445685.2-201ENST00000422551 342 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 Z82205.1-201ENST00000428456 297 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC236972.2-201ENST00000434979 310 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 LINC02540-201ENST00000455554 570 ntTSL 3 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 FO393415.2-201ENST00000480085 343 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC104564.1-201ENST00000493028 407 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 SNORA31.16-201ENST00000516773 139 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 MRPS36P4-201ENST00000534436 298 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC021231.3-201ENST00000558497 370 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 MIR4713-201ENST00000582691 75 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC005899.2-201ENST00000584353 90 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC005014.2-201ENST00000607795 599 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC005520.5-201ENST00000613926 164 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 ZNF299P-201ENST00000406845 1804 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 AC006026.1-201ENST00000444025 1803 ntBASIC1.91□□□□□ -2.1
RTL3Q8N8U3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
RTL3Q8N8U3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.9□□□□□ -2.1
RTL3Q8N8U3 AC073544.1-201ENST00000600110 1595 ntBASIC1.9□□□□□ -2.1
RTL3Q8N8U3 RNU6-234P-201ENST00000365229 104 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 SNORA29-201ENST00000384183 140 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 Y_RNA.533-201ENST00000384596 114 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 AL078595.1-201ENST00000404458 226 ntBASIC1.9□□□□□ -2.11
RTL3Q8N8U3 RNA5SP201-201ENST00000410316 124 ntBASIC1.9□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 106.6 ms