Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 AL163540.1-201ENST00000485382 386 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 RNU4-77P-201ENST00000516692 156 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 RNA5SP54-201ENST00000516951 92 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 SNORA48.11-201ENST00000517015 89 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 RNU6-58P-201ENST00000517143 103 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 AC144568.1-201ENST00000520139 137 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.53□□□□□ -2
VPS52Q8N1B4 AL138963.2-201ENST00000605137 226 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 MIR6895-201ENST00000613497 78 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 AC008121.3-201ENST00000618726 433 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 MIR4272-201ENST00000635924 64 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.53□□□□□ -2
VPS52Q8N1B4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
VPS52Q8N1B4 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.53□□□□□ -2
VPS52Q8N1B4 AC016717.2-201ENST00000609089 5141 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 BX322639.1-202ENST00000423987 2213 ntBASIC2.53□□□□□ -2
VPS52Q8N1B4 MTND5P6-201ENST00000422338 1798 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.52□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.148-201ENST00000363557 117 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.314-201ENST00000365114 102 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.326-201ENST00000365176 113 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNA5SP240-201ENST00000365355 128 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 SNORA22B-201ENST00000383876 138 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 SNORA69.1-201ENST00000390904 137 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-308P-201ENST00000390957 107 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-159P-201ENST00000391080 106 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-1093P-201ENST00000391194 107 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.592-201ENST00000410274 109 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AL590556.1-201ENST00000423231 483 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 CBX3P6-201ENST00000430257 527 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC096638.1-201ENST00000444678 216 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 CHEK2P4-201ENST00000450340 246 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AP000870.1-201ENST00000472927 406 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.661-201ENST00000516003 99 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-475P-201ENST00000516073 104 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-911P-201ENST00000516523 104 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC023442.1-201ENST00000531247 422 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC090617.3-201ENST00000573670 475 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC092447.9-201ENST00000603395 144 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 MIR6840-201ENST00000611937 71 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 AC090517.3-201ENST00000625170 141 ntBASIC2.52□□□□□ -2.01
VPS52Q8N1B4 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.52□□□□□ -2.01
VPS52Q8N1B4 RNU6-944P-201ENST00000364023 107 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 MIR1289-2-201ENST00000408360 111 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.597-201ENST00000410463 100 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS52Q8N1B4 RNU6-1114P-201ENST00000516022 107 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 MIR2355-201ENST00000517199 87 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AC016727.2-201ENST00000603988 621 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AC007485.1-201ENST00000616755 206 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 MIR6873-201ENST00000622788 63 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 AL606534.2-204ENST00000635008 178 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 MTND5P16-201ENST00000460269 1703 ntBASIC2.51□□□□□ -2.01
VPS52Q8N1B4 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS52Q8N1B4 RNU6-222P-201ENST00000362438 107 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.216-201ENST00000364205 93 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 MIR10B-201ENST00000385011 110 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 SNORA12-201ENST00000391162 147 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 RNU2-63P-201ENST00000410792 194 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 EIF1P2-201ENST00000428233 350 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS52Q8N1B4 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS52Q8N1B4 RNU6-988P-201ENST00000519081 107 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 AP003072.1-201ENST00000531740 145 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 AC026470.2-201ENST00000561492 181 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 RPL17P51-201ENST00000605218 238 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 SNORD58B-201ENST00000607313 66 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 AC006157.1-201ENST00000611750 366 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 AC083806.3-201ENST00000614016 455 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 TEX41-243ENST00000614173 190 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS52Q8N1B4 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.5□□□□□ -2.01
VPS52Q8N1B4 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.39-201ENST00000362620 98 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 SNORA63-201ENST00000363450 132 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.202-201ENST00000364083 110 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 RNA5SP125-201ENST00000364843 120 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 RNU6-245P-201ENST00000384020 107 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.557-201ENST00000384680 107 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 RNU6-541P-201ENST00000384709 110 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 USP9YP16-201ENST00000430287 407 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 USP9YP23-201ENST00000455085 407 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 Y_RNA.638-201ENST00000459374 113 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.49□□□□□ -2.01
VPS52Q8N1B4 SNORA25.10-201ENST00000515926 124 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 SNORA40.14-201ENST00000516543 86 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 GNAI2P1-201ENST00000541815 315 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 PRELID2P1-201ENST00000552837 301 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 VN1R91P-201ENST00000594377 169 ntBASIC2.49□□□□□ -2.01
VPS52Q8N1B4 AC022432.1-201ENST00000595739 310 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms