Protein–RNA interactions for Protein: Q8IY21

DDX60, Probable ATP-dependent RNA helicase DDX60, humanhuman

Known RBP Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60Q8IY21 AC025459.1-201ENST00000504072 156 ntBASIC-1.45□□□□□ -2.64
DDX60Q8IY21 MIR548AD-201ENST00000584780 82 ntBASIC-1.45□□□□□ -2.64
DDX60Q8IY21 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-1.45□□□□□ -2.64
DDX60Q8IY21 MIR101-2-201ENST00000362195 79 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-1.46□□□□□ -2.64
DDX60Q8IY21 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AC068135.1-201ENST00000446164 246 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AC007327.1-201ENST00000447461 264 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AL136363.2-201ENST00000604173 851 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AL390208.1-201ENST00000605885 644 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC-1.46□□□□□ -2.64
DDX60Q8IY21 U6.107-201ENST00000637108 79 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 SNORA2.2-201ENST00000365473 135 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AC107401.1-201ENST00000503426 685 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AC078795.2-201ENST00000602835 1252 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 AL450472.1-202ENST00000637286 180 ntBASIC-1.46□□□□□ -2.64
DDX60Q8IY21 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 USP9YP21-201ENST00000420603 432 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 MTCO1P5-201ENST00000433573 344 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 AC092170.1-201ENST00000440211 356 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 BTF3P15-201ENST00000455606 336 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 RN7SKP164-201ENST00000516138 266 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 AC063943.3-201ENST00000615562 356 ntBASIC-1.47□□□□□ -2.64
DDX60Q8IY21 MTND4P9-201ENST00000507819 1346 ntBASIC-1.47□□□□□ -2.65
DDX60Q8IY21 SNORA72.1-201ENST00000363485 129 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC-1.48□□□□□ -2.65
DDX60Q8IY21 GPM6BP2-201ENST00000432046 144 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 GPM6BP1-201ENST00000446387 144 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 RNU6-840P-201ENST00000517275 65 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AC023442.1-201ENST00000531247 422 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AC100830.2-201ENST00000581636 240 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AL390123.1-201ENST00000603216 237 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AL158211.4-201ENST00000606988 584 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC-1.48□□□□□ -2.65
DDX60Q8IY21 AL603758.1-201ENST00000618654 241 ntBASIC-1.48□□□□□ -2.65
DDX60Q8IY21 RNU6-369P-201ENST00000362515 102 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AL590135.1-201ENST00000422215 156 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AC019205.3-201ENST00000424573 156 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 SNRPEP8-201ENST00000442866 260 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AC016700.2-201ENST00000446011 156 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AC015911.1-201ENST00000495111 156 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AL159153.1-201ENST00000619688 317 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 RNY4P27-201ENST00000363341 96 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 SNORA2B-201ENST00000384583 137 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 SNORA26-201ENST00000391286 122 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AL592310.1-201ENST00000414330 671 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 MTND1P33-201ENST00000446251 917 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 AC021146.9-201ENST00000512503 156 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 MIR4306-201ENST00000583390 91 ntBASIC-1.49□□□□□ -2.65
DDX60Q8IY21 Y_RNA.86-201ENST00000363020 111 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 RNU6-1141P-201ENST00000364520 107 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 DPRXP1-201ENST00000426312 460 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 RPL31P54-201ENST00000429803 370 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-1.5□□□□□ -2.65
DDX60Q8IY21 RNU6-1041P-201ENST00000516254 102 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 AC021231.3-201ENST00000558497 370 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 AL442067.1-201ENST00000613261 223 ntBASIC-1.5□□□□□ -2.65
DDX60Q8IY21 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.5□□□□□ -2.65
DDX60Q8IY21 MIR660-201ENST00000385235 97 ntBASIC-1.51□□□□□ -2.65
DDX60Q8IY21 AC092809.3-201ENST00000415453 231 ntBASIC-1.51□□□□□ -2.65
DDX60Q8IY21 MLLT10P1-201ENST00000418346 262 ntBASIC-1.51□□□□□ -2.65
DDX60Q8IY21 AC245008.1-201ENST00000608123 476 ntBASIC-1.51□□□□□ -2.65
DDX60Q8IY21 AC022960.3-201ENST00000619794 441 ntBASIC-1.51□□□□□ -2.65
DDX60Q8IY21 Y_RNA.567-201ENST00000384736 106 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 SNORD100-201ENST00000408573 76 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 RNA5SP470-201ENST00000516463 106 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 AP003168.1-201ENST00000530091 307 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 Z99289.3-201ENST00000605586 594 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 RNA5SP180-201ENST00000516181 101 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 RNU6-881P-201ENST00000516813 102 ntBASIC-1.52□□□□□ -2.65
DDX60Q8IY21 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.52□□□□□ -2.65
DDX60Q8IY21 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.52□□□□□ -2.65
DDX60Q8IY21 ELOCP21-201ENST00000412558 336 ntBASIC-1.53□□□□□ -2.65
DDX60Q8IY21 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC-1.53□□□□□ -2.65
DDX60Q8IY21 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.53□□□□□ -2.65
DDX60Q8IY21 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC-1.53□□□□□ -2.65
DDX60Q8IY21 AC122133.1-201ENST00000613964 233 ntBASIC-1.53□□□□□ -2.65
DDX60Q8IY21 MIR6514-201ENST00000622549 70 ntBASIC-1.53□□□□□ -2.65
DDX60Q8IY21 SNORD115-2-201ENST00000362842 82 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 AC010385.1-201ENST00000412374 256 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC-1.54□□□□□ -2.66
DDX60Q8IY21 MTATP6P30-201ENST00000443540 664 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 RNU6-1232P-201ENST00000516299 86 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 SNORA18.7-201ENST00000516910 131 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 AC091163.3-201ENST00000518269 1144 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 AL162424.1-201ENST00000602325 221 ntBASIC-1.54□□□□□ -2.66
DDX60Q8IY21 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC-1.54□□□□□ -2.66
DDX60Q8IY21 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.54□□□□□ -2.66
DDX60Q8IY21 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.54□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms