Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 Y_RNA.187-201ENST00000363918 113 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNU6-280P-201ENST00000364145 104 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 SNORD42.2-201ENST00000365570 69 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.405-201ENST00000383979 100 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.431-201ENST00000384086 102 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.451-201ENST00000384200 100 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNU6-17P-201ENST00000384245 107 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNU6-18P-201ENST00000384527 107 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.524-201ENST00000384564 100 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Y_RNA.561-201ENST00000384694 100 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 SNORA12.2-201ENST00000391040 156 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 AC007098.1-201ENST00000420122 367 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 Z82188.1-201ENST00000436709 154 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RPL17P19-201ENST00000489069 552 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 MIR449C-201ENST00000516047 92 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNU2-44P-201ENST00000516795 194 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNA5SP137-201ENST00000516833 135 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RNA5SP490-201ENST00000517141 136 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.48□□□□□ -2.01
HERC6Q8IVU3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.48□□□□□ -2.01
HERC6Q8IVU3 MIR1248-201ENST00000629190 106 ntBASIC2.48□□□□□ -2.01
HERC6Q8IVU3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
HERC6Q8IVU3 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HERC6Q8IVU3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 SNORD115-8-201ENST00000363856 82 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 SNORD115-38-201ENST00000365037 82 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 RNU6-245P-201ENST00000384020 107 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 RNU6-474P-201ENST00000384243 107 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MIR29C-201ENST00000385231 88 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 RNU2-48P-201ENST00000410694 191 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MTCYBP6-201ENST00000441810 138 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 PRELID3BP1-201ENST00000457142 540 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 RNU7-14P-201ENST00000459331 62 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 SCARNA16.2-201ENST00000516520 172 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MIR5006-201ENST00000583027 110 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 AC016727.2-201ENST00000603988 621 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 AC067747.1-201ENST00000608026 250 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MIR203B-201ENST00000636080 86 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MIR219B-201ENST00000637023 88 ntBASIC2.47□□□□□ -2.01
HERC6Q8IVU3 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
HERC6Q8IVU3 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.01
HERC6Q8IVU3 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
HERC6Q8IVU3 MIR369-201ENST00000362155 70 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 RNU1-76P-201ENST00000362903 159 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 SNORA67.1-201ENST00000364749 141 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 SNORA18.2-201ENST00000383865 132 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 U8.10-201ENST00000384260 133 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 SNORA67.3-201ENST00000384366 140 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 HMGN2P18-201ENST00000450680 270 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AC093259.1-201ENST00000509755 300 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 RNU6-1098P-201ENST00000516772 96 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AL031274.2-201ENST00000599419 203 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AC080078.3-201ENST00000605407 463 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AL080274.1-201ENST00000605565 220 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 SNORD14A-201ENST00000606526 91 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AC005014.2-201ENST00000607795 599 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.46□□□□□ -2.02
HERC6Q8IVU3 ZNF204P-201ENST00000416749 2397 ntBASIC2.46□□□□□ -2.02
HERC6Q8IVU3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 RNU6-1227P-201ENST00000383981 107 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 RNU6-890P-201ENST00000384121 107 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 RNU6-1011P-201ENST00000384668 107 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 SNORA75.6-201ENST00000391318 127 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 MIR300-201ENST00000401138 83 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 MTCO2P12-201ENST00000427426 682 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AL353997.1-201ENST00000432936 108 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 RPS15AP28-201ENST00000435088 386 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AC018634.1-201ENST00000437554 401 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AC004386.2-201ENST00000441858 148 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.639-201ENST00000458981 102 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 RNU6-58P-201ENST00000517143 103 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AC020661.2-201ENST00000560114 134 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.45□□□□□ -2.02
HERC6Q8IVU3 AC078899.2-201ENST00000595282 212 ntBASIC2.45□□□□□ -2.02
HERC6Q8IVU3 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.99-201ENST00000363138 105 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.146-201ENST00000363549 102 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.197-201ENST00000364004 102 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 MIR221-201ENST00000385135 110 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 MIR190B-201ENST00000401119 79 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
HERC6Q8IVU3 AC074290.1-201ENST00000448883 135 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.44□□□□□ -2.02
HERC6Q8IVU3 TOMM22P6-201ENST00000465035 409 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 AC091144.1-201ENST00000519573 138 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 MIR5701-3-201ENST00000578890 82 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 MIR5701-1-201ENST00000585138 82 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 MIR5701-2-201ENST00000615634 82 ntBASIC2.44□□□□□ -2.02
HERC6Q8IVU3 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
HERC6Q8IVU3 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.43□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.4-201ENST00000362333 112 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.5-201ENST00000362334 102 ntBASIC2.43□□□□□ -2.02
HERC6Q8IVU3 Y_RNA.31-201ENST00000362574 102 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms