Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNU6-360P-201ENST00000390944 104 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 RPS26P42-201ENST00000413485 326 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 RN7SKP210-201ENST00000459176 261 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 RPS26P55-201ENST00000471178 356 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 AC004223.1-201ENST00000479840 271 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 MTCO1P29-201ENST00000496868 288 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 AC090821.2-201ENST00000523552 176 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 AC010525.2-201ENST00000590920 195 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 AC092954.2-201ENST00000609103 430 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 OR4G1P-203ENST00000641984 1631 ntBASIC1.32□□□□□ -2.2
CCDC50Q8IVM0 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 RNU6-254P-201ENST00000363377 107 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 SNORD113-7-201ENST00000363762 77 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 RNU6-1305P-201ENST00000364353 104 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.373-201ENST00000365600 103 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 RNU6-483P-201ENST00000384088 108 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 RNU6-975P-201ENST00000384296 105 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.615-201ENST00000410769 117 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC009237.7-201ENST00000447357 229 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 NFU1P2-201ENST00000448700 469 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 OR2AQ1P-201ENST00000451972 200 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC112492.4-201ENST00000456549 352 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 RPL23AP75-201ENST00000491601 451 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC107401.1-201ENST00000503426 685 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC019176.1-201ENST00000518519 225 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 MTND1P35-201ENST00000526739 508 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC026371.1-201ENST00000551867 419 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC015712.3-201ENST00000559380 164 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 MIR4422-201ENST00000581938 83 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC006001.4-201ENST00000622243 395 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 SCARNA4-201ENST00000629045 128 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 AC121333.1-201ENST00000567488 2709 ntBASIC1.31□□□□□ -2.2
CCDC50Q8IVM0 SNORD50.1-201ENST00000362987 71 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.151-201ENST00000363566 112 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 SNORD26-201ENST00000384147 75 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 RNU6-784P-201ENST00000384330 106 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AL161935.2-201ENST00000414627 60 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AL590632.1-201ENST00000424289 371 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 MTCO1P20-201ENST00000425366 358 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 RPS27P16-201ENST00000425758 201 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 ERLEC1P1-201ENST00000433806 578 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AL135790.2-201ENST00000437701 267 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 RPS29P29-201ENST00000456396 171 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AC007215.1-201ENST00000464893 276 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AC019235.1-201ENST00000503847 207 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AC026470.2-201ENST00000561492 181 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AC100830.2-201ENST00000581636 240 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AP003465.2-201ENST00000602571 373 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AL353997.5-201ENST00000618886 171 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 ZNF204P-201ENST00000416749 2397 ntBASIC1.3□□□□□ -2.2
CCDC50Q8IVM0 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 SNORD116-2-201ENST00000384274 95 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 SNORD116-6-201ENST00000384711 96 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 RNU6-417P-201ENST00000384712 107 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 SNORA40.6-201ENST00000391153 128 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 EBAG9P1-201ENST00000418955 543 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 CST2P1-201ENST00000425770 87 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 Z82205.1-201ENST00000428456 297 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 MTCO3P29-201ENST00000432119 779 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 HMGN2P34-201ENST00000437647 269 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC099513.1-201ENST00000490423 301 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.665-201ENST00000516177 98 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 RNU6-948P-201ENST00000516374 107 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC016957.1-201ENST00000534895 309 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 MIR4421-201ENST00000578133 69 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC004492.1-201ENST00000607036 742 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC245008.1-201ENST00000608123 476 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AL133215.3-201ENST00000609801 448 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AL512598.1-201ENST00000610158 273 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC005858.4-201ENST00000623191 700 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 AC068137.3-201ENST00000639191 341 ntBASIC1.29□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 Y_RNA.287-201ENST00000364853 94 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 SNORA67.2-201ENST00000384300 149 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-933P-201ENST00000384424 107 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-1235P-201ENST00000384559 107 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNA5SP467-201ENST00000391274 118 ntBASIC1.28□□□□□ -2.2
CCDC50Q8IVM0 RNU6-57P-201ENST00000411348 103 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms