Protein–RNA interactions for Protein: Q86UV5

USP48, Ubiquitin carboxyl-terminal hydrolase 48, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP48Q86UV5 RNU1-62P-201ENST00000362599 164 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 Y_RNA.76-201ENST00000362931 109 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 SNORA18.3-201ENST00000384122 132 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 RNU5A-5P-201ENST00000411054 116 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.74□□□□□ -1.81
USP48Q86UV5 AL139281.1-201ENST00000422120 335 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.74□□□□□ -1.81
USP48Q86UV5 RN7SL75P-201ENST00000461926 281 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 SEM1P1-201ENST00000506694 209 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.74□□□□□ -1.81
USP48Q86UV5 AC005562.2-201ENST00000618264 111 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 MIR622-201ENST00000638396 96 ntBASIC3.74□□□□□ -1.81
USP48Q86UV5 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
USP48Q86UV5 Y_RNA.286-201ENST00000364813 102 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 RNU6-886P-201ENST00000384319 105 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 SNORD15B-201ENST00000384714 146 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.73□□□□□ -1.81
USP48Q86UV5 UQCRBP2-201ENST00000447827 297 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 RPS29P12-201ENST00000460178 152 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 AC091179.1-201ENST00000461606 579 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 AC074133.1-201ENST00000515696 183 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.73□□□□□ -1.81
USP48Q86UV5 MZT1P2-201ENST00000604387 248 ntBASIC3.73□□□□□ -1.81
USP48Q86UV5 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.73□□□□□ -1.81
USP48Q86UV5 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.73□□□□□ -1.81
USP48Q86UV5 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
USP48Q86UV5 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP48Q86UV5 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
USP48Q86UV5 MIR29B2-201ENST00000385055 81 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 MIR548M-201ENST00000408260 86 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AC073901.1-201ENST00000462471 408 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AC091179.3-201ENST00000474761 144 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 SERF1AP1-201ENST00000514575 187 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AK6P2-201ENST00000549020 471 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.72□□□□□ -1.81
USP48Q86UV5 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC3.72□□□□□ -1.81
USP48Q86UV5 uc_338.25-201ENST00000613756 156 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AL357075.2-201ENST00000614906 189 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 AC127459.3-201ENST00000624328 466 ntBASIC3.72□□□□□ -1.81
USP48Q86UV5 RNU6-626P-201ENST00000363354 107 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 Y_RNA.200-201ENST00000364018 102 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 Y_RNA.230-201ENST00000364348 109 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 SNORA46-201ENST00000384762 135 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 MIR1298-201ENST00000408783 112 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 RNA5SP184-201ENST00000411071 108 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AL390729.2-201ENST00000416137 156 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AC027124.2-201ENST00000428249 105 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 IFNA11P-201ENST00000446352 526 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AC117440.1-201ENST00000474107 571 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 HSPE1P18-201ENST00000517602 280 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC3.71□□□□□ -1.82
USP48Q86UV5 AC093331.1-201ENST00000521474 169 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AC233702.2-202ENST00000562547 291 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 MIR4423-201ENST00000580922 80 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AL133393.1-201ENST00000603277 287 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 TCL6_2.1-201ENST00000615162 119 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 U2.14-201ENST00000615943 113 ntBASIC3.71□□□□□ -1.82
USP48Q86UV5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC3.71□□□□□ -1.82
USP48Q86UV5 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.71□□□□□ -1.82
USP48Q86UV5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.71□□□□□ -1.82
USP48Q86UV5 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP48Q86UV5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
USP48Q86UV5 AC010329.5-201ENST00000623497 2174 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP48Q86UV5 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
USP48Q86UV5 RNU4-90P-201ENST00000362773 141 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 RNU1-35P-201ENST00000362782 153 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 RNU6-961P-201ENST00000363893 105 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 RNU6-20P-201ENST00000384106 107 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.7□□□□□ -1.82
USP48Q86UV5 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.7□□□□□ -1.82
USP48Q86UV5 SEPT14P8-201ENST00000508026 178 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.7□□□□□ -1.82
USP48Q86UV5 RNA5SP380-201ENST00000517190 98 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 CBX3P4-201ENST00000538909 354 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC3.7□□□□□ -1.82
USP48Q86UV5 MIR4435-1-201ENST00000582552 80 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 SNORD113-5-201ENST00000607261 78 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 MIR7157-201ENST00000635801 60 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 U2.22-201ENST00000636441 106 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC3.7□□□□□ -1.82
USP48Q86UV5 MIR7515-201ENST00000637837 67 ntBASIC3.7□□□□□ -1.82
USP48Q86UV5 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.7□□□□□ -1.82
USP48Q86UV5 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
USP48Q86UV5 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.69□□□□□ -1.82
USP48Q86UV5 AL157777.2-201ENST00000258070 137 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 MIR22-201ENST00000362190 85 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 RNU6-290P-201ENST00000365212 101 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 RNU6-21P-201ENST00000384710 107 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 SNORD67-201ENST00000390833 111 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 RNU6-651P-201ENST00000411040 105 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 MICF-203ENST00000432679 129 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 AC105272.1-201ENST00000438604 198 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 AC009969.1-201ENST00000438726 172 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 AC004386.2-201ENST00000441858 148 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 RNU6-625P-201ENST00000459412 107 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 AC140059.1-201ENST00000489238 361 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 RNU7-110P-201ENST00000516891 62 ntBASIC3.69□□□□□ -1.82
USP48Q86UV5 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms