Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC124303.1-201ENST00000605703 360 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AC090574.1-201ENST00000623186 233 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 AL450472.1-202ENST00000637286 180 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 LINC02555-201ENST00000563933 1951 ntBASIC1.89□□□□□ -2.11
NHLRC1Q6VVB1 MTND4P1-201ENST00000457501 1466 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-562P-201ENST00000362731 107 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP160-201ENST00000364866 120 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1013P-201ENST00000384180 107 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 SNORA8-201ENST00000384574 139 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 MIR548F5-201ENST00000408421 86 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 VN1R36P-201ENST00000414936 291 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 HMGN2P19-201ENST00000425149 265 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 AL021397.1-201ENST00000451806 248 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 PCMTD1P1-201ENST00000455560 355 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 RPS29P27-201ENST00000463711 170 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 IGKV3-31-201ENST00000523109 329 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 APOOP3-201ENST00000536787 586 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 MIR1273D-201ENST00000577266 86 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 MIR4769-201ENST00000584126 77 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 AL096840.1-201ENST00000603287 93 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 SNRPGP20-201ENST00000604477 205 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 ETDC-201ENST00000635820 180 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
NHLRC1Q6VVB1 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNU1-76P-201ENST00000362903 159 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.135-201ENST00000363439 95 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP493-201ENST00000364115 91 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.212-201ENST00000364177 102 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.259-201ENST00000364619 101 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 SNORA29-201ENST00000384183 140 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 SNORA36A-201ENST00000384221 132 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.473-201ENST00000384333 102 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNU2-2P-201ENST00000410396 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RN7SKP223-201ENST00000410582 62 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 AL590632.1-201ENST00000424289 371 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 DAP3P1-201ENST00000441522 278 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 AC114982.1-201ENST00000469402 321 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RPL39P5-202ENST00000512505 151 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1198P-201ENST00000516904 67 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 SNORA44.1-201ENST00000517031 108 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1213P-201ENST00000517075 94 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.718-201ENST00000517110 102 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 CPDP1-201ENST00000579660 283 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 MIR4648-201ENST00000580107 72 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 7SK.7-201ENST00000603504 247 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.15-201ENST00000611544 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.16-201ENST00000613119 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.12-201ENST00000613778 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.20-201ENST00000613956 192 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.9-201ENST00000615427 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.11-201ENST00000616345 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.2-201ENST00000616535 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.3-201ENST00000617785 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.19-201ENST00000618602 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 5S_rRNA.11-201ENST00000618635 84 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 RNU2-1-201ENST00000618664 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.6-201ENST00000619225 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.5-201ENST00000619465 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 U2.10-201ENST00000620268 191 ntBASIC1.87□□□□□ -2.11
NHLRC1Q6VVB1 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AL359851.1-201ENST00000569460 4997 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 MIR369-201ENST00000362155 70 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 Y_RNA.31-201ENST00000362574 102 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-784P-201ENST00000384330 106 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SNORA64-201ENST00000384674 134 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 MIR676-201ENST00000390702 67 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SNORA75.4-201ENST00000391278 119 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SNORA11.4-201ENST00000408823 129 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 NCOR1P3-201ENST00000420479 303 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 MTCO2P12-201ENST00000427426 682 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 RNU7-152P-201ENST00000458982 64 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 MTND5P5-201ENST00000503764 376 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 ACA59.1-201ENST00000515966 143 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-256P-201ENST00000516747 97 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 RNU6-1098P-201ENST00000516772 96 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 RNA5SP364-201ENST00000516938 78 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 SUMO2P18-201ENST00000518873 252 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 DEFB122-202ENST00000569013 197 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AC093913.1-201ENST00000614178 329 ntBASIC1.86□□□□□ -2.11
NHLRC1Q6VVB1 AL138726.1-201ENST00000614873 333 ntBASIC1.86□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms