Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 MRPL35P3-201ENST00000421557 364 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC012306.1-201ENST00000423267 114 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MTCO3P18-201ENST00000440206 761 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MTND1P11-201ENST00000456661 876 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-718P-201ENST00000516166 105 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 RNU6-1098P-201ENST00000516772 96 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC026371.1-201ENST00000551867 419 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 CPDP1-201ENST00000579660 283 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MIR3942-201ENST00000585264 109 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AC146944.4-201ENST00000602697 718 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AL356157.2-201ENST00000605122 111 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AL355802.3-201ENST00000607571 545 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 AL353770.2-201ENST00000620024 78 ntBASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.03□□□□□ -2.24
SMARCD3Q6STE5 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.03□□□□□ -2.25
SMARCD3Q6STE5 AC245060.5-201ENST00000610778 3293 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.89-201ENST00000363031 102 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 U3.9-201ENST00000363823 204 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNU6-534P-201ENST00000364877 106 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNU6-214P-201ENST00000384130 107 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 MIR521-1-201ENST00000384902 87 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNU6-1093P-201ENST00000391194 107 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 NDUFA5P4-201ENST00000436704 385 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 SNRPEP8-201ENST00000442866 260 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RPS29P28-201ENST00000446439 141 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AL163540.1-201ENST00000485382 386 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC093852.1-201ENST00000503587 266 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC025465.3-201ENST00000510570 311 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNA5SP445-201ENST00000515889 115 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNU6-273P-201ENST00000516937 96 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNA5SP490-201ENST00000517141 136 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 RNU6-902P-201ENST00000517212 91 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 DEFB131C-201ENST00000528817 165 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC109635.3-201ENST00000529536 185 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC021231.3-201ENST00000558497 370 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 CYP4A27P-201ENST00000567218 190 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC090517.1-201ENST00000569307 266 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 MIR4498-201ENST00000577599 66 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 SNORA59B-202ENST00000578183 701 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 MIR3672-201ENST00000584290 82 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AL590240.4-201ENST00000616908 390 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AL121890.5-201ENST00000620848 304 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 AC100810.6-201ENST00000638068 285 ntBASIC1.02□□□□□ -2.25
SMARCD3Q6STE5 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AL391987.6-201ENST00000305671 199 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 MIR340-201ENST00000362125 95 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.9-201ENST00000362354 101 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.99-201ENST00000363138 105 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNA5SP493-201ENST00000364115 91 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNU4-56P-201ENST00000364700 142 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.295-201ENST00000364918 102 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNU6-95P-201ENST00000384697 107 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 MIR618-201ENST00000385287 98 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 FGF7P8-201ENST00000402994 292 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 NCOR1P3-201ENST00000420479 303 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 Z82205.1-201ENST00000428456 297 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 MTND3P21-201ENST00000433774 331 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC092473.1-201ENST00000441098 221 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AL035666.1-201ENST00000446195 348 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNU7-14P-201ENST00000459331 62 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC007547.1-201ENST00000462177 490 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 TOMM22P6-201ENST00000465035 409 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 OR2A41P-201ENST00000473586 105 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 RNU6-256P-201ENST00000516747 97 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 EIF4A1P12-201ENST00000551910 141 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC100830.2-201ENST00000581636 240 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AP000654.2-201ENST00000605633 586 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AC009994.1-201ENST00000606889 253 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AL138726.1-201ENST00000614873 333 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 AL157834.3-201ENST00000615543 103 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 MIR3688-2-201ENST00000636963 87 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 MIR3662-201ENST00000637030 95 ntBASIC1.01□□□□□ -2.25
SMARCD3Q6STE5 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
SMARCD3Q6STE5 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
SMARCD3Q6STE5 RNU5B-2P-201ENST00000363036 113 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.100-201ENST00000363141 102 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 RNU6-23P-201ENST00000363283 107 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.212-201ENST00000364177 102 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.332-201ENST00000365271 113 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 SNORA18.2-201ENST00000383865 132 ntBASIC1□□□□□ -2.25
SMARCD3Q6STE5 Y_RNA.453-201ENST00000384223 109 ntBASIC1□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms