Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AC098614.3-201ENST00000438957 440 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2□□□□□ -2.09
CTR9Q6PD62 AC087477.1-201ENST00000465747 340 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 AL117351.2-201ENST00000513571 157 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 DEFB131C-201ENST00000528817 165 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 CBX3P4-201ENST00000538909 354 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 AC018462.2-201ENST00000605375 395 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 AL355073.2-201ENST00000612106 557 ntBASIC2□□□□□ -2.09
CTR9Q6PD62 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC2□□□□□ -2.09
CTR9Q6PD62 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2□□□□□ -2.09
CTR9Q6PD62 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CTR9Q6PD62 Y_RNA.88-201ENST00000363029 99 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 U8.10-201ENST00000384260 133 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 MIR487A-201ENST00000385009 80 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 Z82188.1-201ENST00000436709 154 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 AC107399.1-201ENST00000451226 265 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 AL137159.1-201ENST00000452808 512 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 ATP5EP1-201ENST00000510257 156 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 RNU6-1016P-201ENST00000516689 94 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 HSBP1P1-201ENST00000555205 166 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 AL031274.2-201ENST00000599419 203 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 uc_338.5-201ENST00000611839 155 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.99□□□□□ -2.09
CTR9Q6PD62 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 SCARNA4-201ENST00000629045 128 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 MTND5P9-201ENST00000503854 1755 ntBASIC1.99□□□□□ -2.09
CTR9Q6PD62 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
CTR9Q6PD62 Y_RNA.533-201ENST00000384596 114 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 HMGN2P39-201ENST00000398005 273 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 RNU4-14P-201ENST00000410858 122 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 SRIP3-201ENST00000413200 219 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC243428.1-201ENST00000421099 264 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 OR2AQ1P-201ENST00000451972 200 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 MTND4P17-201ENST00000470444 350 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC132942.1-201ENST00000486753 483 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC093259.1-201ENST00000509755 300 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 RNU6-1098P-201ENST00000516772 96 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC005668.1-201ENST00000571142 476 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 MIR3618-201ENST00000580330 88 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC016727.2-201ENST00000603988 621 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AP000654.2-201ENST00000605633 586 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 MIR502-201ENST00000606349 86 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 AL359314.1-201ENST00000616913 261 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 TPTEP1-208ENST00000636884 213 ntBASIC1.98□□□□□ -2.09
CTR9Q6PD62 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.98□□□□□ -2.09
CTR9Q6PD62 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
CTR9Q6PD62 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
CTR9Q6PD62 RNU1-76P-201ENST00000362903 159 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 SNORA72.1-201ENST00000363485 129 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 RNU6-457P-201ENST00000363999 107 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 RNU6-593P-201ENST00000364716 112 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
CTR9Q6PD62 MIR549A-201ENST00000385268 96 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 Y_RNA.594-201ENST00000410373 140 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 RPL37P10-201ENST00000412884 288 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 HSPE1P21-201ENST00000438283 308 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC1.97□□□□□ -2.09
CTR9Q6PD62 HMGN2P18-201ENST00000450680 270 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 Y_RNA.670-201ENST00000516255 105 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 AC090517.1-201ENST00000569307 266 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.97□□□□□ -2.09
CTR9Q6PD62 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTR9Q6PD62 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CTR9Q6PD62 RNU4-9P-201ENST00000364951 139 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 Y_RNA.474-201ENST00000384341 102 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 Y_RNA.482-201ENST00000384377 111 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 RNU6-601P-201ENST00000384540 107 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 RNU6-1050P-201ENST00000410388 107 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 AL603825.1-201ENST00000438481 80 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 MTND3P10-201ENST00000450967 341 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 AC007215.1-201ENST00000464893 276 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 TOMM22P6-201ENST00000465035 409 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 AC026271.5-201ENST00000577873 130 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 MIR4273-201ENST00000582824 84 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 AC005730.3-201ENST00000583067 366 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.96□□□□□ -2.1
CTR9Q6PD62 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CTR9Q6PD62 Y_RNA.48-201ENST00000362710 103 ntBASIC1.95□□□□□ -2.1
CTR9Q6PD62 SNORA18.2-201ENST00000383865 132 ntBASIC1.95□□□□□ -2.1
CTR9Q6PD62 SNORA12.2-201ENST00000391040 156 ntBASIC1.95□□□□□ -2.1
CTR9Q6PD62 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC1.95□□□□□ -2.1
CTR9Q6PD62 AL035666.1-201ENST00000446195 348 ntBASIC1.95□□□□□ -2.1
CTR9Q6PD62 RPL30P10-201ENST00000488148 337 ntBASIC1.95□□□□□ -2.1
CTR9Q6PD62 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.95□□□□□ -2.1
CTR9Q6PD62 CBX3P8-201ENST00000532412 525 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms