Protein–RNA interactions for Protein: Q66K89

E4F1, Transcription factor E4F1, humanhuman

Predicted RBP Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1Q66K89 Y_RNA.235-201ENST00000364412 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.306-201ENST00000365015 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.312-201ENST00000365089 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.322-201ENST00000365151 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 PTMAP2-201ENST00000397627 327 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.597-201ENST00000410463 100 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AC024067.1-201ENST00000426199 223 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.28□□□□□ -1.88
E4F1Q66K89 AC005326.1-201ENST00000429197 123 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AC104332.1-201ENST00000440471 797 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.650-201ENST00000459002 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 RPL7P49-201ENST00000471402 708 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 KRTAP13-6P-201ENST00000508999 371 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 RNA5SP112-201ENST00000515937 99 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.777-201ENST00000516982 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AC087441.2-201ENST00000529141 262 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 MIR3158-1-201ENST00000583596 81 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 MIR4282-201ENST00000583613 67 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.771-201ENST00000598668 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 AL355512.1-202ENST00000607952 209 ntTSL 5 BASIC3.28□□□□□ -1.88
E4F1Q66K89 MIR7112-201ENST00000616126 65 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 Y_RNA.789-201ENST00000622480 102 ntBASIC3.28□□□□□ -1.88
E4F1Q66K89 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.28□□□□□ -1.88
E4F1Q66K89 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.28□□□□□ -1.88
E4F1Q66K89 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
E4F1Q66K89 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
E4F1Q66K89 RNU6-1020P-201ENST00000363684 107 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 Y_RNA.180-201ENST00000363867 113 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 Y_RNA.329-201ENST00000365209 107 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 CD24P4-201ENST00000382840 243 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 RNU6-1083P-201ENST00000384022 107 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 RNU6-886P-201ENST00000384319 105 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 MIR548M-201ENST00000408260 86 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC3.27□□□□□ -1.89
E4F1Q66K89 AC092017.2-201ENST00000427600 362 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.27□□□□□ -1.89
E4F1Q66K89 CYCSP35-201ENST00000451978 304 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC3.27□□□□□ -1.89
E4F1Q66K89 COX6CP14-201ENST00000469580 174 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 RNU6-191P-201ENST00000516295 94 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 AL137100.2-201ENST00000555786 315 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.27□□□□□ -1.89
E4F1Q66K89 AL020997.2-201ENST00000602607 184 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 AC006133.1-201ENST00000617106 264 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
E4F1Q66K89 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
E4F1Q66K89 AP003122.5-201ENST00000527668 3766 ntBASIC3.27□□□□□ -1.89
E4F1Q66K89 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.26□□□□□ -1.89
E4F1Q66K89 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.26□□□□□ -1.89
E4F1Q66K89 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.26□□□□□ -1.89
E4F1Q66K89 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
E4F1Q66K89 RNU6-454P-201ENST00000364292 107 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 RNU6-47P-201ENST00000383866 107 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 RNA5SP504-201ENST00000410676 117 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 RNU4-61P-201ENST00000411243 107 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 COX6CP10-201ENST00000416832 224 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.26□□□□□ -1.89
E4F1Q66K89 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.26□□□□□ -1.89
E4F1Q66K89 AC109925.1-201ENST00000478069 331 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 RN7SL499P-201ENST00000481141 276 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 RNU2-12P-201ENST00000517216 168 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 AC022559.1-201ENST00000520905 205 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.26□□□□□ -1.89
E4F1Q66K89 AC073349.3-201ENST00000617616 186 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 MIR7975-201ENST00000619350 68 ntBASIC3.26□□□□□ -1.89
E4F1Q66K89 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
E4F1Q66K89 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
E4F1Q66K89 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.26□□□□□ -1.89
E4F1Q66K89 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.26□□□□□ -1.89
E4F1Q66K89 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
E4F1Q66K89 RNU6-923P-201ENST00000364753 107 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 SNORD88.1-201ENST00000408684 91 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.25□□□□□ -1.89
E4F1Q66K89 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.25□□□□□ -1.89
E4F1Q66K89 RNU7-120P-201ENST00000459334 63 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.25□□□□□ -1.89
E4F1Q66K89 RNY3P16-201ENST00000516338 101 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 AC007536.1-201ENST00000533382 349 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.25□□□□□ -1.89
E4F1Q66K89 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
E4F1Q66K89 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.25□□□□□ -1.89
E4F1Q66K89 AC011921.3-201ENST00000605540 361 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
E4F1Q66K89 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
E4F1Q66K89 AC108206.1-201ENST00000570186 4159 ntBASIC3.25□□□□□ -1.89
E4F1Q66K89 AL035425.3-201ENST00000564206 4996 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
E4F1Q66K89 AC091564.4-201ENST00000533934 2194 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 RNU6-486P-201ENST00000363116 107 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 Y_RNA.217-201ENST00000364214 105 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 RNA5SP139-201ENST00000364340 117 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 RNU6-1305P-201ENST00000364353 104 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 Y_RNA.308-201ENST00000365043 101 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 MIR181A2-201ENST00000384863 110 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 MIR29B2-201ENST00000385055 81 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 SNORA48.8-201ENST00000391324 134 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 U3.40-201ENST00000408706 208 ntBASIC3.24□□□□□ -1.89
E4F1Q66K89 BTF3P11-201ENST00000426582 477 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms