Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 RNU6-187P-201ENST00000384139 106 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 SNORD15B-201ENST00000384714 146 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 SNORD67-201ENST00000390833 111 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AC009237.7-201ENST00000447357 229 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AC091021.1-201ENST00000468051 388 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 RPL23AP70-201ENST00000483361 460 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 RNU6-966P-201ENST00000516479 104 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AC104027.1-201ENST00000521887 300 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 MIR3162-201ENST00000581818 82 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AL365265.1-201ENST00000621045 234 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 snoU18.1-201ENST00000629629 71 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AC068205.3-201ENST00000636385 468 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 AC132825.6-201ENST00000638861 357 ntBASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
USPL1Q5W0Q7 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 RNU6-923P-201ENST00000364753 107 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 Y_RNA.308-201ENST00000365043 101 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 MIR549A-201ENST00000385268 96 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 RNU6-493P-201ENST00000391321 108 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AC022018.1-201ENST00000430685 241 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AL135938.1-201ENST00000443141 297 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 RN7SKP132-201ENST00000516001 208 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AP002001.1-203ENST00000534002 267 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AC079598.5-201ENST00000547460 117 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AC009127.3-201ENST00000570531 403 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 DEFB117-201ENST00000602356 141 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 AC108706.1-201ENST00000611053 297 ntBASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
USPL1Q5W0Q7 Y_RNA.170-201ENST00000363746 110 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 SNORD50.2-201ENST00000365465 70 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 Y_RNA.415-201ENST00000384012 112 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 MIR613-201ENST00000385248 95 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 RNU6-394P-201ENST00000410735 107 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AL365496.1-201ENST00000426885 215 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 TOMM22P2-201ENST00000430735 237 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC004386.2-201ENST00000441858 148 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC006539.3-201ENST00000454258 129 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 MIR4308-201ENST00000580634 81 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AL078604.3-201ENST00000615580 211 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC021753.1-201ENST00000635724 168 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC007256.1-201ENST00000392253 2765 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 AC069528.2-201ENST00000624849 1991 ntBASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
USPL1Q5W0Q7 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 MIR22-201ENST00000362190 85 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 RNU6-653P-201ENST00000363074 106 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 RNU1-105P-201ENST00000363470 161 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 Y_RNA.441-201ENST00000384123 112 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 RNA5SP252-201ENST00000391131 119 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 U3.40-201ENST00000408706 208 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 AC027124.2-201ENST00000428249 105 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 CST9LP2-201ENST00000437612 320 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 RPL23AP62-201ENST00000463396 453 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 AC145146.1-201ENST00000496370 254 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 MIR3145-201ENST00000580727 82 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 AL133393.1-201ENST00000603277 287 ntBASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.91□□□□□ -1.78
USPL1Q5W0Q7 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
USPL1Q5W0Q7 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC3.9□□□□□ -1.78
USPL1Q5W0Q7 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
USPL1Q5W0Q7 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.9□□□□□ -1.78
USPL1Q5W0Q7 SNORD113-1-201ENST00000365321 69 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 AL357139.1-201ENST00000407792 426 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RNU6-710P-201ENST00000410424 105 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 AC108938.1-201ENST00000451204 136 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 HMGN1P18-201ENST00000457642 277 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RPL31P41-201ENST00000477967 372 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RNU7-200P-201ENST00000516105 62 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RNU6-436P-201ENST00000516171 114 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RNA5SP367-201ENST00000516557 118 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 RNU6-107P-201ENST00000516643 102 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 MIR3144-201ENST00000579460 79 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 MIR5006-201ENST00000583027 110 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 AC013412.1-201ENST00000610687 192 ntBASIC3.9□□□□□ -1.79
USPL1Q5W0Q7 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 Y_RNA.329-201ENST00000365209 107 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 RN7SKP51-201ENST00000410781 304 ntBASIC3.89□□□□□ -1.79
USPL1Q5W0Q7 RPL36AP48-201ENST00000485521 314 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms