Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 MIR3605-201ENST00000583214 100 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AL353621.2-201ENST00000605340 133 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AC007742.2-201ENST00000618226 398 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 MIR8057-201ENST00000620957 69 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 U6.92-201ENST00000636464 89 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.62□□□□□ -1.99
RNF220Q5VTB9 AP006437.1-201ENST00000641440 3685 ntBASIC2.62□□□□□ -1.99
RNF220Q5VTB9 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 MIR26A1-201ENST00000362205 77 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 U3.8-201ENST00000363675 217 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.389-201ENST00000383924 113 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL356057.3-201ENST00000402607 340 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 RNU6-101P-201ENST00000410323 104 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 RN7SKP284-201ENST00000411002 343 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC010469.2-201ENST00000496412 480 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 SNORA40.9-201ENST00000515895 93 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 MIR4659A-201ENST00000580269 81 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC006504.6-201ENST00000590142 199 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL390123.1-201ENST00000603216 237 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AC124312.5-201ENST00000604451 268 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL357075.2-201ENST00000614906 189 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AL162373.1-201ENST00000620433 407 ntBASIC2.61□□□□□ -1.99
RNF220Q5VTB9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RNF220Q5VTB9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 RNU6-926P-201ENST00000384075 107 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 RNU1-52P-201ENST00000384190 164 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 SNORD14D-201ENST00000384390 87 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.498-201ENST00000384460 102 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 RNU6-823P-201ENST00000391042 103 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 MRPL35P1-201ENST00000404272 572 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 MIR1262-201ENST00000408276 93 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AC007064.1-201ENST00000412238 351 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 RNU6-948P-201ENST00000516374 107 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 RNA5SP137-201ENST00000516833 135 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AC018448.1-201ENST00000552843 316 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 MIR4680-201ENST00000580906 66 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AL121655.1-201ENST00000605811 308 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AC022202.1-201ENST00000613515 211 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 AC240442.1-201ENST00000616055 283 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 MIR3651-201ENST00000630427 90 ntBASIC2.6□□□□□ -1.99
RNF220Q5VTB9 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.6□□□□□ -1.99
RNF220Q5VTB9 Z82195.2-201ENST00000612348 18351 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AC092593.1-201ENST00000515413 1815 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.59□□□□□ -1.99
RNF220Q5VTB9 RNA5SP387-201ENST00000364226 106 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 SNORA63.7-201ENST00000365579 123 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 RNU6-975P-201ENST00000384296 105 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
RNF220Q5VTB9 SNORA11.1-201ENST00000408133 129 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 ELOCP21-201ENST00000412558 336 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AC022018.1-201ENST00000430685 241 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.59□□□□□ -1.99
RNF220Q5VTB9 SCGB1D5P-201ENST00000515134 247 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 RNU6-107P-201ENST00000516643 102 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AC087441.2-201ENST00000529141 262 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AC022432.1-201ENST00000595739 310 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AL031274.2-201ENST00000599419 203 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AL161756.2-201ENST00000604597 246 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.59□□□□□ -1.99
RNF220Q5VTB9 SNORD14A-201ENST00000606526 91 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 AC010205.1-201ENST00000616668 449 ntBASIC2.59□□□□□ -1.99
RNF220Q5VTB9 Y_RNA.333-201ENST00000365274 102 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 Y_RNA.551-201ENST00000384661 102 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 MIR29C-201ENST00000385231 88 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 MIR548B-201ENST00000385247 97 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.58□□□□□ -2
RNF220Q5VTB9 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 RNU6-625P-201ENST00000459412 107 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 U8.20-201ENST00000459445 131 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 RNU7-57P-201ENST00000459540 60 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.58□□□□□ -2
RNF220Q5VTB9 AC067942.3-201ENST00000512025 362 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 RNU2-34P-201ENST00000516534 121 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 RN7SKP57-201ENST00000517248 293 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 AK6P2-201ENST00000549020 471 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 MIR4325-201ENST00000583049 90 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 AC007179.3-201ENST00000604976 235 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 AC096577.2-201ENST00000611455 153 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.58□□□□□ -2
RNF220Q5VTB9 RNU6-450P-201ENST00000364654 107 ntBASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms