Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 AC097463.2-201ENST00000421074 142 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RPL39P38-201ENST00000467018 153 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RPL23AP70-201ENST00000483361 460 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SNORA40.9-201ENST00000515895 93 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.680-201ENST00000516441 93 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 RRN3P3-201ENST00000549207 578 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 MIR3162-201ENST00000581818 82 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 AC005357.1-201ENST00000588399 301 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 MZT1P2-201ENST00000604387 248 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SDR42E1P4-201ENST00000620894 481 ntBASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC3.12□□□□□ -1.91
CCDC178Q5BJE1 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.16-201ENST00000362421 102 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 RNU4-15P-201ENST00000362613 141 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.60-201ENST00000362831 98 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.179-201ENST00000363844 90 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AL139095.1-201ENST00000404326 391 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 MIR320B2-201ENST00000408479 138 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 RNU4-30P-201ENST00000410245 143 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 RNU6-1203P-201ENST00000410703 110 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC027124.2-201ENST00000428249 105 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 ARL5AP4-201ENST00000430731 512 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 UQCRBP2-201ENST00000447827 297 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC140059.1-201ENST00000489238 361 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC107222.1-201ENST00000510899 637 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 SCARNA24.2-201ENST00000516968 130 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC079598.5-201ENST00000547460 117 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AL357075.2-201ENST00000614906 189 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 AC078938.1-201ENST00000620993 318 ntBASIC3.11□□□□□ -1.91
CCDC178Q5BJE1 RNA5SP139-201ENST00000364340 117 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.237-201ENST00000364439 102 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 RNU6-102P-201ENST00000384485 104 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 SNORA12-201ENST00000391162 147 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 MRPL35P1-201ENST00000404272 572 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AL590004.2-201ENST00000404787 371 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC005002.2-201ENST00000438228 269 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AL109933.2-201ENST00000452651 260 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 snoU13.14-201ENST00000459372 104 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC073901.1-201ENST00000462471 408 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.673-201ENST00000516306 88 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.683-201ENST00000516508 93 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 RNU7-110P-201ENST00000516891 62 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 MIR4635-201ENST00000583759 79 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC012433.1-201ENST00000588916 398 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 PCGEM1.1-201ENST00000613431 131 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC138915.1-201ENST00000565427 1685 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 MTND5P35-201ENST00000557537 1720 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 AC091564.4-201ENST00000533934 2194 ntBASIC3.1□□□□□ -1.91
CCDC178Q5BJE1 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 MAPK10-266ENST00000641066 6555 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 Y_RNA.54-201ENST00000362766 105 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU6-626P-201ENST00000363354 107 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU6-961P-201ENST00000363893 105 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU6-20P-201ENST00000384106 107 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU6-1145P-201ENST00000384246 107 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU6-21P-201ENST00000384710 107 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 MIR196B-201ENST00000384852 84 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 SNORA46.1-201ENST00000391069 153 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RNU2-52P-201ENST00000410680 190 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RPS29P12-201ENST00000460178 152 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 AC091179.3-201ENST00000474761 144 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 AC103810.1-201ENST00000579873 453 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 RPL30P11-203ENST00000598995 310 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 SNRPGP20-201ENST00000604477 205 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 AP001282.2-201ENST00000616149 309 ntBASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CCDC178Q5BJE1 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.92
CCDC178Q5BJE1 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 AL391987.6-201ENST00000305671 199 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 RNU5F-3P-201ENST00000363767 117 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 U3.9-201ENST00000363823 204 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 SNORD27-201ENST00000363981 72 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 SNORA20.1-201ENST00000364790 130 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 RNU6-1083P-201ENST00000384022 107 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 RNU6-793P-201ENST00000384233 104 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 Y_RNA.541-201ENST00000384640 113 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 AL033519.2-201ENST00000403958 392 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 MTND4LP30-201ENST00000454092 297 ntBASIC3.08□□□□□ -1.92
CCDC178Q5BJE1 AC007215.1-201ENST00000464893 276 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms