Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 RPS15AP7-201ENST00000439294 405 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AL513328.1-201ENST00000446460 224 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 ANXA2P1-201ENST00000505539 926 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AP002770.2-201ENST00000543613 532 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AC136932.1-201ENST00000574771 208 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 MIR3136-201ENST00000583498 78 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AC090517.3-201ENST00000625170 141 ntBASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
SLC44A4Q53GD3 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 SNORD27-201ENST00000363981 72 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RNU1-109P-201ENST00000383960 147 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RNU6-17P-201ENST00000384245 107 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RNU6-378P-201ENST00000384324 107 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RNU6-18P-201ENST00000384527 107 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 MIR9-1-201ENST00000385198 89 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 MIR208B-201ENST00000401172 77 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 CBX3P9-201ENST00000402326 552 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RNU6-1203P-201ENST00000410703 110 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 HMGN2P35-201ENST00000412164 270 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AL513477.1-202ENST00000417061 214 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 SDAD1P3-201ENST00000427380 333 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC090515.1-201ENST00000465295 476 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC145146.1-201ENST00000496370 254 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 SCARNA3-201ENST00000517097 143 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC022868.1-201ENST00000517767 391 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC023824.2-201ENST00000566185 400 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC090616.3-201ENST00000582184 217 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 AC011476.5-201ENST00000615594 130 ntBASIC2.91□□□□□ -1.94
SLC44A4Q53GD3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 RNU6-859P-201ENST00000362728 107 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 SNORD115-32-201ENST00000364079 82 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 RNU1-112P-201ENST00000364401 164 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.237-201ENST00000364439 102 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.439-201ENST00000384119 94 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 SNORD115-46-201ENST00000390982 71 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 SNORA12-201ENST00000391162 147 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AL138827.1-201ENST00000402666 306 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AP000870.1-201ENST00000472927 406 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC008413.1-201ENST00000511864 177 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC091144.1-201ENST00000519573 138 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 DEFB108E-201ENST00000524692 240 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC004486.1-201ENST00000546846 233 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC093023.1-201ENST00000547375 507 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC027288.2-201ENST00000553028 243 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 UBL5P4-201ENST00000562584 236 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 CYP4A27P-201ENST00000567218 190 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC105245.1-201ENST00000581934 244 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 RMST_6.1-201ENST00000611980 203 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AL590808.1-201ENST00000618696 141 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 AL161431.1-201ENST00000618966 4205 ntBASIC2.9□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.16-201ENST00000362421 102 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNA5SP68-201ENST00000363885 119 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNU6-461P-201ENST00000364195 107 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNU4-56P-201ENST00000364700 142 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNU6-338P-201ENST00000383888 105 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 SNORA70B-201ENST00000384210 135 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNY3P4-201ENST00000384428 101 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.518-201ENST00000384552 113 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.539-201ENST00000384635 107 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 MIR153-2-201ENST00000385225 87 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AL079342.1-201ENST00000401460 267 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC139712.2-201ENST00000424302 339 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC023141.11-201ENST00000508864 202 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNU1-41P-201ENST00000516161 162 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RNU1-48P-201ENST00000516400 162 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC090617.3-201ENST00000573670 475 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 MIR3923-201ENST00000579521 83 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 MIR4300-201ENST00000581016 96 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AL713866.2-201ENST00000603579 219 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AL670379.2-201ENST00000604983 252 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC240442.1-201ENST00000616055 283 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 MIR376A1-201ENST00000616574 68 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AC010329.5-201ENST00000623497 2174 ntBASIC2.89□□□□□ -1.95
SLC44A4Q53GD3 AL391987.6-201ENST00000305671 199 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RNU6-1301P-201ENST00000362724 104 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.319-201ENST00000365138 92 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RNU6-926P-201ENST00000384075 107 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 Y_RNA.515-201ENST00000384535 112 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 SNORA46.1-201ENST00000391069 153 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR548I3-201ENST00000408378 149 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MIR548I1-201ENST00000408810 149 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RNA5SP201-201ENST00000410316 124 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 RNU2-64P-201ENST00000411315 191 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 AC096920.1-201ENST00000423991 241 ntBASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.88□□□□□ -1.95
SLC44A4Q53GD3 MICF-203ENST00000432679 129 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 141.9 ms