Protein–RNA interactions for Protein: Q494X3

ZNF404, Zinc finger protein 404, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404Q494X3 SNORA14.1-201ENST00000516113 141 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 RNU6-430P-201ENST00000517078 107 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC024995.1-201ENST00000523014 93 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 MTND4P7-201ENST00000523876 130 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 MIR4742-201ENST00000581069 85 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 AP000907.4-201ENST00000604143 237 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 Z94722.1-201ENST00000604328 474 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC004492.1-201ENST00000607036 742 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 AC109347.2-201ENST00000610220 349 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 HULC.1-201ENST00000612720 240 ntBASIC0.83□□□□□ -2.28
ZNF404Q494X3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.83□□□□□ -2.28
ZNF404Q494X3 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.83□□□□□ -2.28
ZNF404Q494X3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC0.82□□□□□ -2.28
ZNF404Q494X3 Y_RNA.159-201ENST00000363674 87 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 SNORD114-27-201ENST00000363766 70 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RNU6-1305P-201ENST00000364353 104 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 SNORA25-201ENST00000384384 134 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RNU6-950P-201ENST00000384651 107 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 MIR222-201ENST00000384992 110 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RNA5SP109-201ENST00000391010 116 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RNA5SP323-201ENST00000391094 133 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RPL21P1-201ENST00000399532 476 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 AL445567.1-201ENST00000439121 144 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 RPS23P4-201ENST00000487908 423 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.82□□□□□ -2.28
ZNF404Q494X3 AC004223.2-201ENST00000590309 544 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 AL929325.1-201ENST00000603096 117 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 BX284668.6-201ENST00000606899 438 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 MIR6504-201ENST00000613520 61 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 AC027335.2-201ENST00000624030 375 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 AC068647.2-201ENST00000637380 353 ntBASIC0.82□□□□□ -2.28
ZNF404Q494X3 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC0.81□□□□□ -2.28
ZNF404Q494X3 Y_RNA.287-201ENST00000364853 94 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 RNU6-1286P-201ENST00000383871 107 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 RNU6-968P-201ENST00000384076 107 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 MIR586-201ENST00000385035 97 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AL606923.1-201ENST00000406616 190 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 RNU6-57P-201ENST00000411348 103 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC004866.1-201ENST00000411748 78 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC073415.1-201ENST00000449240 153 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 RNU4ATAC8P-201ENST00000516196 109 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 SUMO2P16-201ENST00000519475 264 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC040904.1-201ENST00000590850 223 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC013244.2-201ENST00000603396 103 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AL022345.2-201ENST00000606307 135 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC064836.2-201ENST00000609491 462 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC021506.2-201ENST00000612354 169 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 TEX41-243ENST00000614173 190 ntTSL 5 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC0.81□□□□□ -2.28
ZNF404Q494X3 AC005609.4-201ENST00000625071 447 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 MTND4P5-201ENST00000435821 1374 ntBASIC0.81□□□□□ -2.28
ZNF404Q494X3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC0.8□□□□□ -2.28
ZNF404Q494X3 MIR96-201ENST00000362288 78 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 Y_RNA.123-201ENST00000363338 102 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 RNU6-1317P-201ENST00000364582 104 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 MIR499A-201ENST00000384903 122 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
ZNF404Q494X3 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
ZNF404Q494X3 RNA5SP467-201ENST00000391274 118 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 AL031667.1-201ENST00000440222 725 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.8□□□□□ -2.28
ZNF404Q494X3 RPS27P1-201ENST00000450552 247 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 HSPE1P13-201ENST00000451143 297 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 RNU6-1069P-201ENST00000516612 133 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 RNU6-113P-201ENST00000516653 101 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 MTCO2P4-201ENST00000517968 247 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 AC104576.1-201ENST00000524225 88 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 MRPS36P4-201ENST00000534436 298 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 TPRKBP2-201ENST00000565969 475 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC0.8□□□□□ -2.28
ZNF404Q494X3 AC097065.2-201ENST00000608159 533 ntBASIC0.8□□□□□ -2.28
ZNF404Q494X3 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC0.79□□□□□ -2.28
ZNF404Q494X3 RNU1-124P-201ENST00000363861 145 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 SNORD114-2-201ENST00000363953 78 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 Y_RNA.238-201ENST00000364441 102 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 MIR532-201ENST00000385025 91 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 MIR146A-201ENST00000385201 99 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC010154.1-201ENST00000425857 269 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 RNU7-57P-201ENST00000459540 60 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 RPL39P38-201ENST00000467018 153 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 RNU6-189P-201ENST00000516120 101 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 SNORD116-28-201ENST00000516123 91 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC087854.1-201ENST00000519706 414 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC025423.5-201ENST00000550230 219 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC146944.4-201ENST00000602697 718 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 AC136443.5-201ENST00000603741 370 ntBASIC0.79□□□□□ -2.28
ZNF404Q494X3 SNRPGP20-201ENST00000604477 205 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms