Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.40-201ENST00000362645 93 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 U8.10-201ENST00000384260 133 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.526-201ENST00000384572 110 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MIR32-201ENST00000384965 70 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MIR153-2-201ENST00000385225 87 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 RNA5SP270-201ENST00000411361 118 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC114482.1-201ENST00000418010 247 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 DPH3P2-201ENST00000422618 250 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AL590556.1-201ENST00000423231 483 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AIMP1P2-201ENST00000425294 312 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 MTCYBP9-201ENST00000431021 303 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MTCO3P8-201ENST00000453691 755 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 U8.22-201ENST00000459141 133 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 snoU13.14-201ENST00000459372 104 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC010655.3-201ENST00000478818 450 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC107032.1-201ENST00000485945 480 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC132942.1-201ENST00000486753 483 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MIR2355-201ENST00000517199 87 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC021231.3-201ENST00000558497 370 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC105137.2-201ENST00000569073 466 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 PRR13P7-201ENST00000605538 430 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MIR6840-201ENST00000611937 71 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 AC137590.2-201ENST00000619709 240 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 TTK-211ENST00000627129 240 ntTSL 5 BASIC2□□□□□ -2.09
SNAI3Q3KNW1 CTSLP2-204ENST00000629029 392 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 MIR203B-201ENST00000636080 86 ntBASIC2□□□□□ -2.09
SNAI3Q3KNW1 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.47-201ENST00000362697 108 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 U3.13-201ENST00000364804 214 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 SNORA63.7-201ENST00000365579 123 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU6-708P-201ENST00000384217 107 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU1-57P-201ENST00000384491 166 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.551-201ENST00000384661 102 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNA5SP213-201ENST00000391031 106 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU6-1109P-201ENST00000391187 107 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 SNORD23.1-201ENST00000408212 104 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AL590135.1-201ENST00000422215 156 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC019205.3-201ENST00000424573 156 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC018634.1-201ENST00000437554 401 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC009238.1-201ENST00000442165 424 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC073910.1-201ENST00000445047 438 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC016700.2-201ENST00000446011 156 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC009237.6-201ENST00000446969 424 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU7-87P-201ENST00000459343 62 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU5F-2P-201ENST00000516066 82 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RNA5SP24-201ENST00000516478 95 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 SNORA31.16-201ENST00000516773 139 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AP002770.2-201ENST00000543613 532 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AL442163.3-201ENST00000554110 156 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC090617.3-201ENST00000573670 475 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 MIR3126-201ENST00000577443 74 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 MIR4503-201ENST00000582187 83 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 MIR5007-201ENST00000583098 95 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 RPL30P11-203ENST00000598995 310 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC073410.2-201ENST00000603240 332 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 DLEU2_2.2-201ENST00000615474 90 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 7SK.10-201ENST00000621414 298 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 MIR6766-201ENST00000622641 72 ntBASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
SNAI3Q3KNW1 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RNA5SP289-201ENST00000362332 137 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.27-201ENST00000362540 103 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 Y_RNA.176-201ENST00000363815 109 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 SNORD115-8-201ENST00000363856 82 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RNU4-50P-201ENST00000364361 141 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 SNORD115-38-201ENST00000365037 82 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RNU6-26P-201ENST00000383985 107 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 MIR628-201ENST00000385229 95 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RPS26P42-201ENST00000413485 326 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AC012306.1-201ENST00000423267 114 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 FCF1P4-201ENST00000448326 183 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 HMGB1P35-201ENST00000503360 598 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 MRPS35P2-201ENST00000508242 191 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 RNU4ATAC17P-201ENST00000517272 120 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AC091144.1-201ENST00000519573 138 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AC131281.1-201ENST00000522984 164 ntBASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.98□□□□□ -2.09
SNAI3Q3KNW1 CYCSP26-201ENST00000534107 320 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms