Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC1.7□□□□□ -2.14
SCN1BQ07699 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.7□□□□□ -2.14
SCN1BQ07699 RNU4-49P-201ENST00000516080 140 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 SNORA25.14-201ENST00000516481 132 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 RNU1-54P-201ENST00000517181 120 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 AC027288.2-201ENST00000553028 243 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 MIR4435-1-201ENST00000582552 80 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 MIR4273-201ENST00000582824 84 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 SNORD11B-201ENST00000607707 90 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.7□□□□□ -2.14
SCN1BQ07699 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
SCN1BQ07699 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
SCN1BQ07699 snoU2-30.2-201ENST00000362805 70 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNU6-1059P-201ENST00000363752 98 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNU6-873P-201ENST00000363833 107 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 Y_RNA.533-201ENST00000384596 114 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNU6-541P-201ENST00000384709 110 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 MIR1267-201ENST00000408723 78 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNA5SP425-201ENST00000410336 112 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AL139156.1-201ENST00000412785 841 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AC243428.1-201ENST00000421099 264 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 DPH3P2-201ENST00000422618 250 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 MTCO3P29-201ENST00000432119 779 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN1BQ07699 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 MTND1P17-201ENST00000448961 204 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 PPP1R2P5-201ENST00000457256 603 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNU6-566P-201ENST00000516790 107 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 RNU6-1198P-201ENST00000516904 67 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 IGKV3-31-201ENST00000523109 329 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 AL158827.2-201ENST00000602494 330 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 SNRPGP19-201ENST00000603826 189 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 MIR6128-201ENST00000615528 109 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.69□□□□□ -2.14
SCN1BQ07699 AL691447.3-201ENST00000635020 330 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 AC073869.6-201ENST00000640656 341 ntBASIC1.69□□□□□ -2.14
SCN1BQ07699 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC1.69□□□□□ -2.14
SCN1BQ07699 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
SCN1BQ07699 RNU6-727P-201ENST00000363592 107 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 SNORA63D-201ENST00000364359 132 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 MIR1277-201ENST00000408536 78 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 RNU2-20P-201ENST00000410425 191 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 AC007098.1-201ENST00000420122 367 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC1.68□□□□□ -2.14
SCN1BQ07699 snoU13.9-201ENST00000458927 103 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 UBE2DNL-203ENST00000474922 222 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 AC027575.1-201ENST00000481064 460 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 AC011352.1-201ENST00000512300 793 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 HSBP1P1-201ENST00000555205 166 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 UBL5P4-201ENST00000562584 236 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.68□□□□□ -2.14
SCN1BQ07699 MIR4790-201ENST00000577799 79 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 MIR5696-201ENST00000578474 85 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 7SK.7-201ENST00000603504 247 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 snoZ196.1-201ENST00000625269 89 ntBASIC1.68□□□□□ -2.14
SCN1BQ07699 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
SCN1BQ07699 Y_RNA.86-201ENST00000363020 111 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 Y_RNA.111-201ENST00000363248 100 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 SNORD87-201ENST00000364849 89 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 RNU6-417P-201ENST00000384712 107 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AL139396.1-201ENST00000421137 167 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AL445685.2-201ENST00000422551 342 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 USP9YP30-201ENST00000430729 455 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AC096638.1-201ENST00000444678 216 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN1BQ07699 RPL26P26-201ENST00000480251 434 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.67□□□□□ -2.14
SCN1BQ07699 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.67□□□□□ -2.14
SCN1BQ07699 MIR1273D-201ENST00000577266 86 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 MIR5089-201ENST00000580047 84 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.15-201ENST00000611544 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.16-201ENST00000613119 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.12-201ENST00000613778 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.20-201ENST00000613956 192 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.9-201ENST00000615427 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.11-201ENST00000616345 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.2-201ENST00000616535 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.3-201ENST00000617785 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.19-201ENST00000618602 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 RNU2-1-201ENST00000618664 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.6-201ENST00000619225 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.5-201ENST00000619465 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AC009248.2-201ENST00000619826 254 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 U2.10-201ENST00000620268 191 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AC064859.1-201ENST00000624741 174 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 MIR219B-201ENST00000637023 88 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 MTND4P12-201ENST00000498999 1377 ntBASIC1.67□□□□□ -2.14
SCN1BQ07699 AC100821.1-201ENST00000523153 2479 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
SCN1BQ07699 RNU4-42P-201ENST00000364738 142 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 Y_RNA.301-201ENST00000364990 103 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 RNU6-17P-201ENST00000384245 107 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 RNU6-18P-201ENST00000384527 107 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.66□□□□□ -2.14
SCN1BQ07699 MIR1253-201ENST00000408273 105 ntBASIC1.66□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms