Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC005520.5-201ENST00000613926 164 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 IGHVIII-44-202ENST00000636235 289 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 SNORD98-201ENST00000636377 67 ntBASIC1.63□□□□□ -2.15
CKAP4Q07065 AC233981.2-201ENST00000611524 1614 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
CKAP4Q07065 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
CKAP4Q07065 RNU4-82P-201ENST00000362443 140 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 RNU6-1115P-201ENST00000362490 106 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 Y_RNA.48-201ENST00000362710 103 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 Y_RNA.146-201ENST00000363549 102 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 SNORD115-32-201ENST00000364079 82 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 Y_RNA.394-201ENST00000383942 103 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 Y_RNA.395-201ENST00000383945 109 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 MIR559-201ENST00000385188 96 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 SNORA3.2-201ENST00000408221 125 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 RNA5SP201-201ENST00000410316 124 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 RPS26P42-201ENST00000413485 326 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AC244636.1-201ENST00000421152 228 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AL590135.1-201ENST00000422215 156 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AC019205.3-201ENST00000424573 156 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.62□□□□□ -2.15
CKAP4Q07065 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.62□□□□□ -2.15
CKAP4Q07065 AC016700.2-201ENST00000446011 156 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AL353752.1-201ENST00000454946 260 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AC015911.1-201ENST00000495111 156 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 RNU6-470P-201ENST00000515954 104 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AC233702.2-202ENST00000562547 291 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AC093249.1-201ENST00000567049 203 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.62□□□□□ -2.15
CKAP4Q07065 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC1.62□□□□□ -2.15
CKAP4Q07065 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC1.62□□□□□ -2.15
CKAP4Q07065 RPL30P11-203ENST00000598995 310 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AL031274.2-201ENST00000599419 203 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AL713866.2-201ENST00000603579 219 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 Z98751.3-201ENST00000604447 521 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 AL080274.1-201ENST00000605565 220 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 MIR502-201ENST00000606349 86 ntBASIC1.62□□□□□ -2.15
CKAP4Q07065 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CKAP4Q07065 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
CKAP4Q07065 RNU4-15P-201ENST00000362613 141 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 RNY1P16-201ENST00000363063 111 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 Y_RNA.197-201ENST00000364004 102 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 RNU6-694P-201ENST00000364071 147 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 RNU4-9P-201ENST00000364951 139 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 MIR95-201ENST00000385072 81 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 MTCYBP2-201ENST00000407745 171 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC012306.1-201ENST00000423267 114 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 Z82188.1-201ENST00000436709 154 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 HSPE1P21-201ENST00000438283 308 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC1.61□□□□□ -2.15
CKAP4Q07065 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.61□□□□□ -2.15
CKAP4Q07065 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.61□□□□□ -2.15
CKAP4Q07065 RN7SKP210-201ENST00000459176 261 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC027575.1-201ENST00000481064 460 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 RPL17P19-201ENST00000489069 552 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.61□□□□□ -2.15
CKAP4Q07065 AC021146.2-201ENST00000504736 556 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 Y_RNA.701-201ENST00000516812 110 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AL590705.4-201ENST00000532209 134 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 MIR4672-201ENST00000583126 81 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC080078.3-201ENST00000605407 463 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 BX248123.2-201ENST00000606318 124 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.61□□□□□ -2.15
CKAP4Q07065 AC091925.1-201ENST00000623204 462 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 AC022140.2-201ENST00000623500 188 ntBASIC1.61□□□□□ -2.15
CKAP4Q07065 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
CKAP4Q07065 RNU6-490P-201ENST00000362985 107 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 RNU1-42P-201ENST00000364033 160 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 RNA5SP240-201ENST00000365355 128 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 U8.10-201ENST00000384260 133 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 Y_RNA.463-201ENST00000384271 102 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 MIR583-201ENST00000384846 75 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 SNORA12.2-201ENST00000391040 156 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.6□□□□□ -2.15
CKAP4Q07065 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CKAP4Q07065 snoU13.30-201ENST00000458951 104 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC087477.1-201ENST00000465747 340 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AL049873.1-201ENST00000480540 376 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC022493.2-201ENST00000506122 481 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.6□□□□□ -2.15
CKAP4Q07065 RNU6-1170P-201ENST00000515974 106 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 RNU6-120P-201ENST00000516077 103 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 RNU6-567P-201ENST00000516746 107 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 RNU6-250P-201ENST00000516958 103 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 CYP4A27P-201ENST00000567218 190 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CKAP4Q07065 AC044792.1-201ENST00000593294 196 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.6□□□□□ -2.15
CKAP4Q07065 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 MESTIT1_1.1-201ENST00000618871 140 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC137590.2-201ENST00000619709 240 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 MIR5739-201ENST00000619803 80 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 AC064859.1-201ENST00000624741 174 ntBASIC1.6□□□□□ -2.15
CKAP4Q07065 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.6□□□□□ -2.15
CKAP4Q07065 Y_RNA.5-201ENST00000362334 102 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 Y_RNA.112-201ENST00000363250 102 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 SNORD115-8-201ENST00000363856 82 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 RNU4-42P-201ENST00000364738 142 ntBASIC1.59□□□□□ -2.15
CKAP4Q07065 SNORD115-38-201ENST00000365037 82 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms