Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 AC233981.2-201ENST00000611524 1614 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS1Q01581 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 Y_RNA.9-201ENST00000362354 101 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 RNU6-562P-201ENST00000362731 107 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 RNU4-12P-201ENST00000365233 139 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 Y_RNA.450-201ENST00000384198 113 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 RNU6-790P-201ENST00000384479 105 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 Y_RNA.530-201ENST00000384587 101 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 MTCO3P46-201ENST00000425787 232 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 MTCO3P8-201ENST00000453691 755 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 AC087477.1-201ENST00000465747 340 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 RPL23AP75-201ENST00000491601 451 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 RNU6-256P-201ENST00000516747 97 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 SNORA31.17-201ENST00000516953 127 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 SUB1P4-201ENST00000566062 339 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 MIR5094-201ENST00000578766 85 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 MIR3942-201ENST00000585264 109 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 RPL17P51-201ENST00000605218 238 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS1Q01581 AC005562.2-201ENST00000618264 111 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.3□□□□□ -2.2
HMGCS1Q01581 ZNF209P-201ENST00000593450 2304 ntBASIC1.3□□□□□ -2.2
HMGCS1Q01581 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
HMGCS1Q01581 MTND5P9-201ENST00000503854 1755 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
HMGCS1Q01581 Y_RNA.89-201ENST00000363031 102 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 Y_RNA.212-201ENST00000364177 102 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RNU6-877P-201ENST00000383868 107 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RNU6-203P-201ENST00000384038 104 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RNU6-439P-201ENST00000384188 106 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 MIR758-201ENST00000390227 88 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RNU6-1148P-201ENST00000410992 104 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RPS26P42-201ENST00000413485 326 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 BTF3P4-201ENST00000418852 495 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AC099677.2-201ENST00000436385 175 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AC007395.1-201ENST00000451333 677 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 OR2AQ1P-201ENST00000451972 200 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 PCMTD1P1-201ENST00000455560 355 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AC112492.4-201ENST00000456549 352 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RN7SKP210-201ENST00000459176 261 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 RNU7-95P-201ENST00000459222 64 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 MTCYBP18-201ENST00000501056 747 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AP003033.1-201ENST00000527244 415 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 AL161670.1-201ENST00000554348 137 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 DNAJC19P9-201ENST00000555084 351 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 AC068338.1-201ENST00000565567 176 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 MIR5006-201ENST00000583027 110 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AP000907.4-201ENST00000604143 237 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 AC083806.3-201ENST00000614016 455 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.29□□□□□ -2.2
HMGCS1Q01581 AL159152.1-201ENST00000635019 2587 ntBASIC1.29□□□□□ -2.2
HMGCS1Q01581 MIR378A-201ENST00000362177 66 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 Y_RNA.100-201ENST00000363141 102 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 Y_RNA.132-201ENST00000363421 102 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 Y_RNA.135-201ENST00000363439 95 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 RNU6-534P-201ENST00000364877 106 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 Y_RNA.414-201ENST00000384011 101 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 SNORD115-47-201ENST00000391226 86 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AP1B1P2-201ENST00000416196 106 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 ZNF885P-201ENST00000420174 1098 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 Z82188.1-201ENST00000436709 154 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AL353572.1-201ENST00000442490 417 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AL357134.1-201ENST00000445848 426 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC016717.1-201ENST00000448918 286 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC079354.2-201ENST00000453523 154 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC005908.1-201ENST00000468701 347 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 RNU6-273P-201ENST00000516937 96 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 RNU1-92P-201ENST00000517017 135 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 TCL6_2.1-201ENST00000615162 119 ntBASIC1.28□□□□□ -2.2
HMGCS1Q01581 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.28□□□□□ -2.2
HMGCS1Q01581 AL161722.3-201ENST00000605789 2983 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.27□□□□□ -2.21
HMGCS1Q01581 RNU6-862P-201ENST00000362804 105 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 RNU6-112P-201ENST00000363599 104 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 Y_RNA.295-201ENST00000364918 102 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 SNORD116-11-201ENST00000383882 92 ntBASIC1.27□□□□□ -2.21
HMGCS1Q01581 RNU6-1215P-201ENST00000384441 102 ntBASIC1.27□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms