Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MIR9-1-201ENST00000385198 89 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNA5SP354-201ENST00000391247 136 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AL138827.1-201ENST00000402666 306 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AL139095.1-201ENST00000404326 391 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AC007215.1-201ENST00000464893 276 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AK6P2-201ENST00000549020 471 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AL109918.3-201ENST00000603072 338 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 U2.14-201ENST00000615943 113 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 AC006001.4-201ENST00000622243 395 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 SNORA50A-202ENST00000629536 136 ntBASIC3.26□□□□□ -1.89
HERVK_113P62684 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
HERVK_113P62684 BX322639.1-202ENST00000423987 2213 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 AC103988.1-201ENST00000566382 2177 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 RNU6-859P-201ENST00000362728 107 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 RNU6-655P-201ENST00000362858 107 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 Y_RNA.269-201ENST00000364685 89 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 Y_RNA.569-201ENST00000384749 103 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 Y_RNA.570-201ENST00000384750 101 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 MIR186-201ENST00000384988 86 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 AL512633.1-201ENST00000399931 655 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.25□□□□□ -1.89
HERVK_113P62684 RNU6-625P-201ENST00000459412 107 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 RNA5SP76-201ENST00000516277 87 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 RNU2-31P-201ENST00000516954 155 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.25□□□□□ -1.89
HERVK_113P62684 SNRPGP20-201ENST00000604477 205 ntBASIC3.25□□□□□ -1.89
HERVK_113P62684 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.25□□□□□ -1.89
HERVK_113P62684 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.25□□□□□ -1.89
HERVK_113P62684 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113P62684 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113P62684 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113P62684 Y_RNA.331-201ENST00000365267 102 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 RNU6-1027P-201ENST00000383998 107 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 Y_RNA.498-201ENST00000384460 102 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 RNU1-57P-201ENST00000384491 166 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 AIMP1P2-201ENST00000425294 312 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AL365496.1-201ENST00000426885 215 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 EEF1B2P7-201ENST00000451177 676 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 RPL23AP3-201ENST00000453844 468 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC091179.3-201ENST00000474761 144 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.24□□□□□ -1.89
HERVK_113P62684 RNU4-71P-201ENST00000516258 113 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC3.24□□□□□ -1.89
HERVK_113P62684 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
HERVK_113P62684 AC091544.4-201ENST00000555268 342 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 AC130289.1-201ENST00000577321 73 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 MIR4423-201ENST00000580922 80 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC3.24□□□□□ -1.89
HERVK_113P62684 AC008749.1-201ENST00000597650 306 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC009779.6-201ENST00000603972 165 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 AC099778.2-201ENST00000610904 211 ntBASIC3.24□□□□□ -1.89
HERVK_113P62684 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
HERVK_113P62684 AC099654.7-201ENST00000635788 2127 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 MAPK10-362ENST00000641864 4484 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 SNORA25.1-201ENST00000362326 128 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 snoU2_19.1-201ENST00000362361 80 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU4-15P-201ENST00000362613 141 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 Y_RNA.230-201ENST00000364348 109 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU6-245P-201ENST00000384020 107 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU6-209P-201ENST00000384118 107 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU6-514P-201ENST00000384208 107 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNA5SP21-201ENST00000410917 96 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU2-14P-201ENST00000411053 191 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 RNU2-64P-201ENST00000411315 191 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 BMS1P22-201ENST00000414726 313 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AL451074.5-201ENST00000415894 435 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AL390729.2-201ENST00000416137 156 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC3.23□□□□□ -1.89
HERVK_113P62684 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.23□□□□□ -1.89
HERVK_113P62684 Z98742.2-201ENST00000431564 187 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 snoU13.14-201ENST00000459372 104 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AL121594.1-201ENST00000475906 575 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AC145146.1-201ENST00000496370 254 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 CYCSP23-201ENST00000519781 313 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AC018448.1-201ENST00000552843 316 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AL356575.1-201ENST00000603008 283 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 AC005520.5-201ENST00000613926 164 ntBASIC3.23□□□□□ -1.89
HERVK_113P62684 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HERVK_113P62684 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERVK_113P62684 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HERVK_113P62684 AP003122.5-201ENST00000527668 3766 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 Y_RNA.44-201ENST00000362676 108 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RNU6-1210P-201ENST00000363775 107 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RNU6-326P-201ENST00000365480 107 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AL590004.2-201ENST00000404787 371 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RNA5SP508-201ENST00000411327 119 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RPL23AP36-201ENST00000413895 458 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC027124.2-201ENST00000428249 105 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 POLR2KP2-201ENST00000438155 177 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC007395.1-201ENST00000451333 677 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RPL23AP70-201ENST00000483361 460 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 RPS27P26-201ENST00000494583 239 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC233702.2-202ENST00000562547 291 ntBASIC3.22□□□□□ -1.89
HERVK_113P62684 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms