Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
VBP1P61758 RNU6-1067P-201ENST00000384752 107 ntBASIC0.05□□□□□ -2.4
VBP1P61758 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.05□□□□□ -2.4
VBP1P61758 AL354692.1-201ENST00000423044 315 ntBASIC0.05□□□□□ -2.4
VBP1P61758 MTCYBP10-201ENST00000424905 650 ntBASIC0.05□□□□□ -2.4
VBP1P61758 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.05□□□□□ -2.4
VBP1P61758 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
VBP1P61758 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.05□□□□□ -2.4
VBP1P61758 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC0.05□□□□□ -2.4
VBP1P61758 RNU6-323P-201ENST00000521915 107 ntBASIC0.05□□□□□ -2.4
VBP1P61758 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC0.05□□□□□ -2.4
VBP1P61758 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.05□□□□□ -2.4
VBP1P61758 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC0.05□□□□□ -2.4
VBP1P61758 AL021368.1-201ENST00000607490 540 ntBASIC0.05□□□□□ -2.4
VBP1P61758 AC122133.1-201ENST00000613964 233 ntBASIC0.05□□□□□ -2.4
VBP1P61758 TCL6_2.1-201ENST00000615162 119 ntBASIC0.05□□□□□ -2.4
VBP1P61758 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.05□□□□□ -2.4
VBP1P61758 RNU6-660P-201ENST00000364566 109 ntBASIC0.04□□□□□ -2.4
VBP1P61758 RNU6-533P-201ENST00000384144 107 ntBASIC0.04□□□□□ -2.4
VBP1P61758 RNU6-424P-201ENST00000384367 105 ntBASIC0.04□□□□□ -2.4
VBP1P61758 MIR140-201ENST00000385282 100 ntBASIC0.04□□□□□ -2.4
VBP1P61758 RNU6-550P-201ENST00000391057 101 ntBASIC0.04□□□□□ -2.4
VBP1P61758 SNORD115.1-201ENST00000391109 76 ntBASIC0.04□□□□□ -2.4
VBP1P61758 RNU6-177P-201ENST00000411257 104 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AL663109.1-201ENST00000411498 844 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC106883.1-201ENST00000418805 562 ntBASIC0.04□□□□□ -2.4
VBP1P61758 USP9YP29-201ENST00000445112 563 ntBASIC0.04□□□□□ -2.4
VBP1P61758 USP9YP25-201ENST00000457708 443 ntBASIC0.04□□□□□ -2.4
VBP1P61758 MTCO2P6-201ENST00000463134 685 ntBASIC0.04□□□□□ -2.4
VBP1P61758 MTCO2P29-201ENST00000465212 189 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC116562.3-201ENST00000506136 177 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC0.04□□□□□ -2.4
VBP1P61758 SCARNA24.1-201ENST00000516465 137 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC022868.1-201ENST00000517767 391 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC068587.5-201ENST00000528506 175 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.04□□□□□ -2.4
VBP1P61758 AC004584.2-201ENST00000570407 410 ntBASIC0.04□□□□□ -2.4
VBP1P61758 AC091805.2-201ENST00000603848 235 ntBASIC0.04□□□□□ -2.4
VBP1P61758 SNRPGP20-201ENST00000604477 205 ntBASIC0.04□□□□□ -2.4
VBP1P61758 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC0.04□□□□□ -2.4
VBP1P61758 SNORA25.3-201ENST00000363205 127 ntBASIC0.03□□□□□ -2.4
VBP1P61758 RNU6-1240P-201ENST00000365155 104 ntBASIC0.03□□□□□ -2.4
VBP1P61758 RNU4-45P-201ENST00000365469 141 ntBASIC0.03□□□□□ -2.4
VBP1P61758 SNORA67.2-201ENST00000384300 149 ntBASIC0.03□□□□□ -2.4
VBP1P61758 RNU6-1257P-201ENST00000384625 110 ntBASIC0.03□□□□□ -2.4
VBP1P61758 RNA5SP504-201ENST00000410676 117 ntBASIC0.03□□□□□ -2.4
VBP1P61758 RNU2-72P-201ENST00000411175 163 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC0.03□□□□□ -2.4
VBP1P61758 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC0.03□□□□□ -2.4
VBP1P61758 MTCO1P19-201ENST00000443487 500 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC009237.7-201ENST00000447357 229 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC112204.1-201ENST00000502591 103 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.03□□□□□ -2.4
VBP1P61758 AC022616.3-201ENST00000523940 148 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AP003716.2-201ENST00000528260 108 ntBASIC0.03□□□□□ -2.4
VBP1P61758 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
VBP1P61758 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.03□□□□□ -2.4
VBP1P61758 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.03□□□□□ -2.4
VBP1P61758 MTND1P15-201ENST00000579262 949 ntBASIC0.03□□□□□ -2.4
VBP1P61758 MIR151B-201ENST00000584249 96 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC004223.2-201ENST00000590309 544 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AL162424.1-201ENST00000602325 221 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AL117336.2-201ENST00000602435 335 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AP000907.4-201ENST00000604143 237 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC007014.2-201ENST00000615581 479 ntBASIC0.03□□□□□ -2.4
VBP1P61758 SEPT14P17-201ENST00000617978 177 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AL607023.1-201ENST00000620045 248 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC011155.2-201ENST00000623202 216 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AC008133.2-201ENST00000624540 351 ntBASIC0.03□□□□□ -2.4
VBP1P61758 AL589743.1-201ENST00000551932 2712 ntBASIC0.02□□□□□ -2.41
VBP1P61758 MIR1185-1-201ENST00000408598 86 ntBASIC0.02□□□□□ -2.41
VBP1P61758 RNU6-387P-201ENST00000411331 105 ntBASIC0.02□□□□□ -2.41
VBP1P61758 EXOSC3P1-201ENST00000448649 500 ntBASIC0.02□□□□□ -2.41
VBP1P61758 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC0.02□□□□□ -2.41
VBP1P61758 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.02□□□□□ -2.41
VBP1P61758 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.02□□□□□ -2.41
VBP1P61758 MIR4711-201ENST00000578274 70 ntBASIC0.02□□□□□ -2.41
VBP1P61758 AC002044.1-201ENST00000606707 158 ntBASIC0.02□□□□□ -2.41
VBP1P61758 MIR6504-201ENST00000613520 61 ntBASIC0.02□□□□□ -2.41
VBP1P61758 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC0.02□□□□□ -2.41
VBP1P61758 AC009159.2-201ENST00000617603 606 ntBASIC0.02□□□□□ -2.41
VBP1P61758 snoZ196.1-201ENST00000625269 89 ntBASIC0.02□□□□□ -2.41
VBP1P61758 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
VBP1P61758 MIR103A2-201ENST00000362154 78 ntBASIC0.01□□□□□ -2.41
VBP1P61758 SNORD44.1-201ENST00000363202 61 ntBASIC0.01□□□□□ -2.41
VBP1P61758 Y_RNA.191-201ENST00000363972 113 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RNU6-793P-201ENST00000384233 104 ntBASIC0.01□□□□□ -2.41
VBP1P61758 MIR526A1-201ENST00000384897 85 ntBASIC0.01□□□□□ -2.41
VBP1P61758 MIR586-201ENST00000385035 97 ntBASIC0.01□□□□□ -2.41
VBP1P61758 SNORD105-201ENST00000386910 85 ntBASIC0.01□□□□□ -2.41
VBP1P61758 MIR548J-201ENST00000408833 112 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RPS27AP14-201ENST00000422868 454 ntBASIC0.01□□□□□ -2.41
VBP1P61758 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.01□□□□□ -2.41
VBP1P61758 ISCA1P6-201ENST00000427740 390 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RPL31P35-201ENST00000431058 377 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RPL39P5-202ENST00000512505 151 ntBASIC0.01□□□□□ -2.41
VBP1P61758 RNU7-12P-201ENST00000516030 62 ntBASIC0.01□□□□□ -2.41
VBP1P61758 SNORD111.1-201ENST00000516421 86 ntBASIC0.01□□□□□ -2.41
VBP1P61758 SNORA25.17-201ENST00000517184 124 ntBASIC0.01□□□□□ -2.41
VBP1P61758 AC036111.3-201ENST00000526389 112 ntBASIC0.01□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms