Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC0.63□□□□□ -2.31
ACTBP60709 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC0.63□□□□□ -2.31
ACTBP60709 RPS29P27-201ENST00000463711 170 ntBASIC0.63□□□□□ -2.31
ACTBP60709 SRRM1P2-201ENST00000464531 1192 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNA5SP168-201ENST00000516642 112 ntBASIC0.63□□□□□ -2.31
ACTBP60709 RNU6-1223P-201ENST00000517124 104 ntBASIC0.63□□□□□ -2.31
ACTBP60709 SCARNA1-201ENST00000517138 166 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC090142.3-201ENST00000519012 385 ntBASIC0.63□□□□□ -2.31
ACTBP60709 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC0.63□□□□□ -2.31
ACTBP60709 MTND2P32-201ENST00000521584 1038 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC025423.5-201ENST00000550230 219 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AL137100.2-201ENST00000555786 315 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AL391840.1-201ENST00000571144 367 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.63□□□□□ -2.31
ACTBP60709 BNIP3P39-201ENST00000601077 554 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC068790.2-201ENST00000602601 557 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC022217.4-201ENST00000604389 163 ntBASIC0.63□□□□□ -2.31
ACTBP60709 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
ACTBP60709 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.63□□□□□ -2.31
ACTBP60709 MIR373-201ENST00000362273 69 ntBASIC0.62□□□□□ -2.31
ACTBP60709 RNU6-505P-201ENST00000384427 107 ntBASIC0.62□□□□□ -2.31
ACTBP60709 MIR549A-201ENST00000385268 96 ntBASIC0.62□□□□□ -2.31
ACTBP60709 RNA5SP467-201ENST00000391274 118 ntBASIC0.62□□□□□ -2.31
ACTBP60709 MIR548J-201ENST00000408833 112 ntBASIC0.62□□□□□ -2.31
ACTBP60709 CDK8P2-201ENST00000415020 547 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC0.62□□□□□ -2.31
ACTBP60709 AC063976.4-201ENST00000421971 163 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC0.62□□□□□ -2.31
ACTBP60709 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.62□□□□□ -2.31
ACTBP60709 AC004386.2-201ENST00000441858 148 ntBASIC0.62□□□□□ -2.31
ACTBP60709 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.62□□□□□ -2.31
ACTBP60709 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.62□□□□□ -2.31
ACTBP60709 HSFY5P-201ENST00000453726 309 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.62□□□□□ -2.31
ACTBP60709 SNORD79.1-201ENST00000516069 84 ntBASIC0.62□□□□□ -2.31
ACTBP60709 RNU6-1069P-201ENST00000516612 133 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AC068790.6-201ENST00000602558 258 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AL513534.2-201ENST00000603836 250 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AC005014.3-201ENST00000605985 190 ntBASIC0.62□□□□□ -2.31
ACTBP60709 MIR98-201ENST00000606724 119 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AP001506.1-201ENST00000615444 211 ntBASIC0.62□□□□□ -2.31
ACTBP60709 RMST_2.1-201ENST00000617263 136 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AC139792.3-201ENST00000623525 224 ntBASIC0.62□□□□□ -2.31
ACTBP60709 AC009541.1-201ENST00000438279 2662 ntBASIC0.62□□□□□ -2.31
ACTBP60709 ANKRD20A17P-201ENST00000511745 1330 ntBASIC0.62□□□□□ -2.31
ACTBP60709 RNU6-17P-201ENST00000384245 107 ntBASIC0.61□□□□□ -2.31
ACTBP60709 SNORA67.2-201ENST00000384300 149 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6-18P-201ENST00000384527 107 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6-910P-201ENST00000390844 107 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU2-29P-201ENST00000410423 189 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC010154.1-201ENST00000425857 269 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.61□□□□□ -2.31
ACTBP60709 TIMM9P3-201ENST00000428659 274 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC002429.1-201ENST00000437672 148 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC245047.7-201ENST00000440265 293 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC022364.2-201ENST00000457963 554 ntBASIC0.61□□□□□ -2.31
ACTBP60709 SNORD124-201ENST00000459577 104 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC007215.1-201ENST00000464893 276 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC048334.1-201ENST00000477975 159 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6-1129P-201ENST00000515964 104 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC106038.2-201ENST00000520706 568 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6-323P-201ENST00000521915 107 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AL590705.4-201ENST00000532209 134 ntBASIC0.61□□□□□ -2.31
ACTBP60709 MTATP6P3-201ENST00000581686 676 ntBASIC0.61□□□□□ -2.31
ACTBP60709 MIR5006-201ENST00000583027 110 ntBASIC0.61□□□□□ -2.31
ACTBP60709 Z99497.2-201ENST00000603634 310 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC011458.1-201ENST00000604034 617 ntBASIC0.61□□□□□ -2.31
ACTBP60709 RNU6-85P-201ENST00000605989 107 ntBASIC0.61□□□□□ -2.31
ACTBP60709 AC008873.1-201ENST00000625051 138 ntBASIC0.61□□□□□ -2.31
ACTBP60709 Y_RNA.363-201ENST00000365529 113 ntBASIC0.6□□□□□ -2.31
ACTBP60709 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC004941.2-201ENST00000427009 228 ntBASIC0.6□□□□□ -2.31
ACTBP60709 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC0.6□□□□□ -2.31
ACTBP60709 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.6□□□□□ -2.31
ACTBP60709 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.6□□□□□ -2.31
ACTBP60709 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.6□□□□□ -2.31
ACTBP60709 AC105417.1-201ENST00000514691 285 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AL137161.1-201ENST00000532231 390 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC0.6□□□□□ -2.31
ACTBP60709 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC090616.2-202ENST00000584248 222 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC245014.2-201ENST00000603689 287 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC246785.4-201ENST00000605374 287 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AL513423.1-201ENST00000621695 132 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC006001.4-201ENST00000622243 395 ntBASIC0.6□□□□□ -2.31
ACTBP60709 AC018630.2-201ENST00000534866 2403 ntBASIC0.59□□□□□ -2.31
ACTBP60709 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
ACTBP60709 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
ACTBP60709 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.59□□□□□ -2.31
ACTBP60709 RNU6-227P-201ENST00000362865 103 ntBASIC0.59□□□□□ -2.31
ACTBP60709 RNU6-282P-201ENST00000365357 103 ntBASIC0.59□□□□□ -2.31
ACTBP60709 MIR653-201ENST00000385279 96 ntBASIC0.59□□□□□ -2.31
ACTBP60709 RN7SKP200-201ENST00000410564 320 ntBASIC0.59□□□□□ -2.31
ACTBP60709 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.59□□□□□ -2.31
ACTBP60709 MTCO3P8-201ENST00000453691 755 ntBASIC0.59□□□□□ -2.31
ACTBP60709 AL033528.1-201ENST00000453780 140 ntBASIC0.59□□□□□ -2.31
ACTBP60709 AC010493.1-201ENST00000513479 292 ntBASIC0.59□□□□□ -2.31
ACTBP60709 RNU6-612P-201ENST00000516909 102 ntBASIC0.59□□□□□ -2.31
ACTBP60709 CYP3A137P-201ENST00000562436 69 ntBASIC0.59□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 172.5 ms