Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1P60507 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1P60507 FAM35BP-202ENST00000497389 3337 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 RNU1-18P-201ENST00000363062 164 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 RNU6-454P-201ENST00000364292 107 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 RNU4-11P-201ENST00000365287 132 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 AL591034.1-201ENST00000407447 340 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 BPY2DP-201ENST00000422208 265 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1P60507 RN7SL863P-201ENST00000462370 296 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 RNU6-581P-201ENST00000516214 105 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1P60507 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.5□□□□□ -1.85
ERVFC1P60507 AC069294.1-201ENST00000608397 350 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.5□□□□□ -1.85
ERVFC1P60507 AC018692.3-201ENST00000623929 123 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.5□□□□□ -1.85
ERVFC1P60507 CEP170P1-201ENST00000502249 4587 ntBASIC3.5□□□□□ -1.85
ERVFC1P60507 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1P60507 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
ERVFC1P60507 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1P60507 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1P60507 snoU2_19.4-201ENST00000364329 80 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 SNORA8.3-201ENST00000384679 139 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 SNORA26.5-201ENST00000391215 123 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 AL355497.1-201ENST00000406262 551 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.49□□□□□ -1.85
ERVFC1P60507 AC012308.1-201ENST00000451232 178 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 MIR5688-201ENST00000580619 83 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 AL137790.1-201ENST00000634283 177 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.49□□□□□ -1.85
ERVFC1P60507 AC134026.1-201ENST00000623249 2239 ntBASIC3.49□□□□□ -1.85
ERVFC1P60507 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
ERVFC1P60507 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
ERVFC1P60507 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
ERVFC1P60507 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERVFC1P60507 MAPK10-373ENST00000641983 6772 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERVFC1P60507 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERVFC1P60507 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.48□□□□□ -1.85
ERVFC1P60507 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERVFC1P60507 RNU6-153P-201ENST00000364422 104 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 RNU6-283P-201ENST00000364788 107 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 RNU6-80P-201ENST00000384195 107 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.48□□□□□ -1.85
ERVFC1P60507 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC3.48□□□□□ -1.85
ERVFC1P60507 YPEL5P1-201ENST00000419731 367 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AL353705.1-201ENST00000433468 480 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AL135790.2-201ENST00000437701 267 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AL357552.1-201ENST00000445254 415 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AIG1P1-201ENST00000503376 148 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 SNORA25.12-201ENST00000516202 82 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 ACA59.2-201ENST00000517061 156 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 AL110115.1-201ENST00000614396 364 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 SNORD98-201ENST00000636377 67 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
ERVFC1P60507 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.48□□□□□ -1.85
ERVFC1P60507 AC010329.5-201ENST00000623497 2174 ntBASIC3.48□□□□□ -1.85
ERVFC1P60507 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
ERVFC1P60507 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ERVFC1P60507 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.47□□□□□ -1.85
ERVFC1P60507 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
ERVFC1P60507 RNU6-727P-201ENST00000363592 107 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 Y_RNA.172-201ENST00000363765 102 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 Y_RNA.287-201ENST00000364853 94 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 RNU6-1325P-201ENST00000364905 105 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 Y_RNA.337-201ENST00000365312 102 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC3.47□□□□□ -1.85
ERVFC1P60507 MIR549A-201ENST00000385268 96 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 RNU6-710P-201ENST00000410424 105 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC099548.1-201ENST00000421443 426 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.47□□□□□ -1.85
ERVFC1P60507 AC008885.1-201ENST00000514930 301 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 RNU6-344P-201ENST00000516635 111 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC109810.1-201ENST00000534066 224 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC006199.1-201ENST00000548728 219 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 MIR3923-201ENST00000579521 83 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 TUG1_4.1-201ENST00000619464 181 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC022149.2-201ENST00000621061 203 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AC008873.1-201ENST00000625051 138 ntBASIC3.47□□□□□ -1.85
ERVFC1P60507 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.47□□□□□ -1.85
ERVFC1P60507 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
ERVFC1P60507 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
ERVFC1P60507 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
ERVFC1P60507 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.46□□□□□ -1.86
ERVFC1P60507 AC068700.1-201ENST00000565862 3754 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ERVFC1P60507 RNU1-70P-201ENST00000362618 164 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 RNU6-324P-201ENST00000363957 106 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 SNORD115-30-201ENST00000364117 82 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 SNORA72.4-201ENST00000384174 132 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 Y_RNA.563-201ENST00000384707 108 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 MIR208B-201ENST00000401172 77 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
ERVFC1P60507 AL031121.1-201ENST00000406553 254 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 AC010154.1-201ENST00000425857 269 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC3.46□□□□□ -1.86
ERVFC1P60507 RNU7-197P-201ENST00000458836 62 ntBASIC3.46□□□□□ -1.86
ERVFC1P60507 AC146507.2-201ENST00000460608 476 ntBASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms