Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNU2-16P-201ENST00000410712 136 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH4P55283 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.29□□□□□ -2.2
CDH4P55283 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH4P55283 AC107401.1-201ENST00000503426 685 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AC011406.1-201ENST00000512440 370 ntBASIC1.29□□□□□ -2.2
CDH4P55283 RNU6-1053P-201ENST00000515930 101 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.29□□□□□ -2.2
CDH4P55283 DEFB131C-201ENST00000528817 165 ntBASIC1.29□□□□□ -2.2
CDH4P55283 RRN3P3-201ENST00000549207 578 ntBASIC1.29□□□□□ -2.2
CDH4P55283 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.29□□□□□ -2.2
CDH4P55283 SCOCP1-201ENST00000554676 349 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AL157687.1-201ENST00000554853 619 ntBASIC1.29□□□□□ -2.2
CDH4P55283 MIR3937-201ENST00000580135 106 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AC073413.2-201ENST00000604332 360 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AL357078.3-201ENST00000607528 618 ntBASIC1.29□□□□□ -2.2
CDH4P55283 AC126177.8-201ENST00000618339 1015 ntBASIC1.29□□□□□ -2.2
CDH4P55283 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC1.29□□□□□ -2.2
CDH4P55283 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.28□□□□□ -2.2
CDH4P55283 RNU6-562P-201ENST00000362731 107 ntBASIC1.28□□□□□ -2.2
CDH4P55283 RNU5B-2P-201ENST00000363036 113 ntBASIC1.28□□□□□ -2.2
CDH4P55283 RNU6-1317P-201ENST00000364582 104 ntBASIC1.28□□□□□ -2.2
CDH4P55283 Y_RNA.327-201ENST00000365201 102 ntBASIC1.28□□□□□ -2.2
CDH4P55283 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH4P55283 MIR300-201ENST00000401138 83 ntBASIC1.28□□□□□ -2.2
CDH4P55283 MRPL35P1-201ENST00000404272 572 ntBASIC1.28□□□□□ -2.2
CDH4P55283 RNU6-1068P-201ENST00000410958 103 ntBASIC1.28□□□□□ -2.2
CDH4P55283 AC060773.1-201ENST00000421698 310 ntBASIC1.28□□□□□ -2.2
CDH4P55283 RPS27P16-201ENST00000425758 201 ntBASIC1.28□□□□□ -2.2
CDH4P55283 MTND3P9-201ENST00000429526 346 ntBASIC1.28□□□□□ -2.2
CDH4P55283 AL359672.1-201ENST00000442302 409 ntBASIC1.28□□□□□ -2.2
CDH4P55283 MTND2P22-201ENST00000444325 1033 ntBASIC1.28□□□□□ -2.2
CDH4P55283 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.28□□□□□ -2.2
CDH4P55283 RPS29P29-201ENST00000456396 171 ntBASIC1.28□□□□□ -2.2
CDH4P55283 SNORA19.2-201ENST00000516013 114 ntBASIC1.28□□□□□ -2.2
CDH4P55283 RNA5SP384-201ENST00000516615 116 ntBASIC1.28□□□□□ -2.2
CDH4P55283 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH4P55283 AC016256.1-201ENST00000547971 354 ntBASIC1.28□□□□□ -2.2
CDH4P55283 MIR4753-201ENST00000585119 83 ntBASIC1.28□□□□□ -2.2
CDH4P55283 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC1.28□□□□□ -2.2
CDH4P55283 AC092954.2-201ENST00000609103 430 ntBASIC1.28□□□□□ -2.2
CDH4P55283 AC005562.2-201ENST00000618264 111 ntBASIC1.28□□□□□ -2.2
CDH4P55283 AC073534.2-201ENST00000620377 381 ntBASIC1.28□□□□□ -2.2
CDH4P55283 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.28□□□□□ -2.2
CDH4P55283 Y_RNA.231-201ENST00000364358 102 ntBASIC1.27□□□□□ -2.21
CDH4P55283 SNORA63D-201ENST00000364359 132 ntBASIC1.27□□□□□ -2.21
CDH4P55283 SNORD26-201ENST00000384147 75 ntBASIC1.27□□□□□ -2.21
CDH4P55283 SNORA29-201ENST00000384183 140 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AL117342.1-201ENST00000404861 406 ntBASIC1.27□□□□□ -2.21
CDH4P55283 MIR1283-1-201ENST00000408494 87 ntBASIC1.27□□□□□ -2.21
CDH4P55283 RNU6-321P-201ENST00000410912 106 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.27□□□□□ -2.21
CDH4P55283 MTCO1P20-201ENST00000425366 358 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AC027119.1-201ENST00000440877 241 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AC069257.2-201ENST00000441819 155 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.27□□□□□ -2.21
CDH4P55283 AC067942.3-201ENST00000512025 362 ntBASIC1.27□□□□□ -2.21
CDH4P55283 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
CDH4P55283 AL512360.1-201ENST00000555346 234 ntBASIC1.27□□□□□ -2.21
CDH4P55283 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.27□□□□□ -2.21
CDH4P55283 CPDP1-201ENST00000579660 283 ntBASIC1.27□□□□□ -2.21
CDH4P55283 RNU6-89P-201ENST00000606519 100 ntBASIC1.27□□□□□ -2.21
CDH4P55283 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
CDH4P55283 SNORD33-201ENST00000362761 85 ntBASIC1.26□□□□□ -2.21
CDH4P55283 EIF4E2P1-201ENST00000393781 255 ntBASIC1.26□□□□□ -2.21
CDH4P55283 RNU6-908P-201ENST00000410160 94 ntBASIC1.26□□□□□ -2.21
CDH4P55283 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH4P55283 CST2P1-201ENST00000425770 87 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH4P55283 AC073910.1-201ENST00000445047 438 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH4P55283 OR2AQ1P-201ENST00000451972 200 ntBASIC1.26□□□□□ -2.21
CDH4P55283 RPL31P58-201ENST00000469001 379 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC005840.1-201ENST00000498412 377 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC093534.1-201ENST00000504977 132 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.26□□□□□ -2.21
CDH4P55283 TRMT112P2-201ENST00000512910 132 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC1.26□□□□□ -2.21
CDH4P55283 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH4P55283 MRPS36P4-201ENST00000534436 298 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC024909.2-201ENST00000553035 286 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC005668.1-201ENST00000571142 476 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC100830.2-201ENST00000581636 240 ntBASIC1.26□□□□□ -2.21
CDH4P55283 MIR5006-201ENST00000583027 110 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC104458.1-201ENST00000608243 463 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC103591.3-201ENST00000608684 209 ntBASIC1.26□□□□□ -2.21
CDH4P55283 MIR6078-201ENST00000611069 100 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AL078604.3-201ENST00000615580 211 ntBASIC1.26□□□□□ -2.21
CDH4P55283 AC048344.4-201ENST00000619744 527 ntBASIC1.26□□□□□ -2.21
CDH4P55283 FER-210ENST00000628534 558 ntTSL 5 BASIC1.26□□□□□ -2.21
CDH4P55283 AC068137.3-201ENST00000639191 341 ntBASIC1.26□□□□□ -2.21
CDH4P55283 BX322639.1-202ENST00000423987 2213 ntBASIC1.25□□□□□ -2.21
CDH4P55283 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.25□□□□□ -2.21
CDH4P55283 Y_RNA.41-201ENST00000362646 102 ntBASIC1.25□□□□□ -2.21
CDH4P55283 Y_RNA.194-201ENST00000363985 102 ntBASIC1.25□□□□□ -2.21
CDH4P55283 RNU6-483P-201ENST00000384088 108 ntBASIC1.25□□□□□ -2.21
CDH4P55283 RNU6-939P-201ENST00000384634 107 ntBASIC1.25□□□□□ -2.21
CDH4P55283 Y_RNA.559-201ENST00000384686 107 ntBASIC1.25□□□□□ -2.21
CDH4P55283 RNA5SP494-201ENST00000410653 129 ntBASIC1.25□□□□□ -2.21
CDH4P55283 RNU6-325P-201ENST00000411132 105 ntBASIC1.25□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms