Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 NEAT1_2.1-201ENST00000620525 105 ntBASIC-1.51□□□□□ -2.65
CLTCL1P53675 RNU6-187P-201ENST00000384139 106 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 RNU6-622P-201ENST00000384272 103 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 MIR660-201ENST00000385235 97 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 SNORD100-201ENST00000408573 76 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 MTCO1P5-201ENST00000433573 344 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 AL133217.1-201ENST00000450980 425 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 AC105029.1-201ENST00000520250 669 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 AC125232.2-201ENST00000592457 143 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 AC122133.1-201ENST00000613964 233 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 AC010133.1-201ENST00000615809 842 ntBASIC-1.52□□□□□ -2.65
CLTCL1P53675 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 RNU5E-8P-201ENST00000363502 116 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 RNU6-24P-201ENST00000384440 107 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 TPMTP2-201ENST00000414372 726 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC-1.53□□□□□ -2.65
CLTCL1P53675 AC015724.1-201ENST00000478577 156 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 MIR4782-201ENST00000577987 79 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 AL390208.1-201ENST00000605885 644 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 MIR6514-201ENST00000622549 70 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 U6.107-201ENST00000637108 79 ntBASIC-1.53□□□□□ -2.65
CLTCL1P53675 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-1.54□□□□□ -2.66
CLTCL1P53675 MTND4P15-201ENST00000437913 1033 ntBASIC-1.54□□□□□ -2.66
CLTCL1P53675 ZNF736P1Y-201ENST00000440402 1276 ntBASIC-1.54□□□□□ -2.66
CLTCL1P53675 AC093303.1-201ENST00000514549 295 ntBASIC-1.54□□□□□ -2.66
CLTCL1P53675 RNU6-840P-201ENST00000517275 65 ntBASIC-1.54□□□□□ -2.66
CLTCL1P53675 SNORA59B-202ENST00000578183 701 ntBASIC-1.54□□□□□ -2.66
CLTCL1P53675 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 RNU6-40P-201ENST00000384254 107 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 SNORA12.2-201ENST00000391040 156 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC092170.1-201ENST00000440211 356 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-1.55□□□□□ -2.66
CLTCL1P53675 HIGD1AP6-201ENST00000521833 279 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-1.55□□□□□ -2.66
CLTCL1P53675 CCDC7-209ENST00000539197 581 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.55□□□□□ -2.66
CLTCL1P53675 AL136363.2-201ENST00000604173 851 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AL450472.1-202ENST00000637286 180 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 SNORA72.1-201ENST00000363485 129 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC-1.55□□□□□ -2.66
CLTCL1P53675 GPM6BP2-201ENST00000432046 144 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC092427.1-201ENST00000439177 601 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 GPM6BP1-201ENST00000446387 144 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC079354.2-201ENST00000453523 154 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 BTF3P15-201ENST00000455606 336 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 SCARNA11.2-201ENST00000517183 154 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC004217.3-201ENST00000551552 878 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 MIR4804-201ENST00000581683 73 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 AC245008.1-201ENST00000608123 476 ntBASIC-1.55□□□□□ -2.66
CLTCL1P53675 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
CLTCL1P53675 Y_RNA.270-201ENST00000364693 104 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 Y_RNA.293-201ENST00000364908 93 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 Y_RNA.477-201ENST00000384352 108 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-1.56□□□□□ -2.66
CLTCL1P53675 DPRXP1-201ENST00000426312 460 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 RN7SKP19-201ENST00000516016 252 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 AC078795.3-201ENST00000602913 472 ntBASIC-1.56□□□□□ -2.66
CLTCL1P53675 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.57□□□□□ -2.66
CLTCL1P53675 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC-1.57□□□□□ -2.66
CLTCL1P53675 HSFY5P-201ENST00000453726 309 ntBASIC-1.57□□□□□ -2.66
CLTCL1P53675 AC021231.3-201ENST00000558497 370 ntBASIC-1.57□□□□□ -2.66
CLTCL1P53675 Z99289.3-201ENST00000605586 594 ntBASIC-1.57□□□□□ -2.66
CLTCL1P53675 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC-1.57□□□□□ -2.66
CLTCL1P53675 MTND4P9-201ENST00000507819 1346 ntBASIC-1.57□□□□□ -2.66
CLTCL1P53675 BTF3L4P3-201ENST00000418879 476 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 RPL31P54-201ENST00000429803 370 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 SNORA18.7-201ENST00000516910 131 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 RNU6-158P-201ENST00000517104 100 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AC091163.3-201ENST00000518269 1144 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AC023442.1-201ENST00000531247 422 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 MIR4778-201ENST00000577635 80 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 MIR548AD-201ENST00000584780 82 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AC007684.1-201ENST00000609671 477 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AL359075.3-201ENST00000613288 217 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 Y_RNA.375-201ENST00000365625 101 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AL663109.1-201ENST00000411498 844 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AC010385.1-201ENST00000412374 256 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-1.58□□□□□ -2.66
CLTCL1P53675 AL606517.2-201ENST00000442855 241 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 EXOSC3P1-201ENST00000448649 500 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-1.58□□□□□ -2.66
CLTCL1P53675 MIR3925-201ENST00000584674 77 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 AC135803.1-201ENST00000608748 565 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 MIR8054-201ENST00000620877 86 ntBASIC-1.58□□□□□ -2.66
CLTCL1P53675 USP9YP21-201ENST00000420603 432 ntBASIC-1.59□□□□□ -2.66
CLTCL1P53675 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-1.59□□□□□ -2.66
CLTCL1P53675 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC-1.59□□□□□ -2.66
CLTCL1P53675 AL158211.4-201ENST00000606988 584 ntBASIC-1.59□□□□□ -2.66
CLTCL1P53675 RNU6-440P-201ENST00000390882 105 ntBASIC-1.6□□□□□ -2.67
CLTCL1P53675 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC-1.6□□□□□ -2.67
CLTCL1P53675 AC010153.1-201ENST00000432862 727 ntBASIC-1.6□□□□□ -2.67
CLTCL1P53675 AL139824.2-201ENST00000458731 1095 ntBASIC-1.6□□□□□ -2.67
CLTCL1P53675 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC-1.6□□□□□ -2.67
CLTCL1P53675 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC-1.6□□□□□ -2.67
CLTCL1P53675 AL159153.1-201ENST00000619688 317 ntBASIC-1.6□□□□□ -2.67
CLTCL1P53675 RNU6-1167P-201ENST00000363227 94 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 RNY4P27-201ENST00000363341 96 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 RNA5SP467-201ENST00000391274 118 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 ELOCP21-201ENST00000412558 336 ntBASIC-1.61□□□□□ -2.67
CLTCL1P53675 AL355994.1-201ENST00000424379 260 ntBASIC-1.61□□□□□ -2.67
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms