Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC090517.1-201ENST00000569307 266 ntBASIC2.72□□□□□ -1.97
COPAP53621 MIR5695-201ENST00000579717 85 ntBASIC2.72□□□□□ -1.97
COPAP53621 MIR3945-201ENST00000581853 98 ntBASIC2.72□□□□□ -1.97
COPAP53621 AL162730.1-201ENST00000605734 292 ntBASIC2.72□□□□□ -1.97
COPAP53621 AC245884.12-201ENST00000615364 59 ntBASIC2.72□□□□□ -1.97
COPAP53621 MIR6817-201ENST00000615588 66 ntBASIC2.72□□□□□ -1.97
COPAP53621 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.72□□□□□ -1.97
COPAP53621 ZNF204P-201ENST00000416749 2397 ntBASIC2.72□□□□□ -1.97
COPAP53621 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
COPAP53621 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
COPAP53621 RNU6-879P-201ENST00000364328 108 ntBASIC2.71□□□□□ -1.98
COPAP53621 RNU4-50P-201ENST00000364361 141 ntBASIC2.71□□□□□ -1.98
COPAP53621 WARS2P1-201ENST00000429678 537 ntBASIC2.71□□□□□ -1.98
COPAP53621 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.71□□□□□ -1.98
COPAP53621 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.71□□□□□ -1.98
COPAP53621 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC2.71□□□□□ -1.98
COPAP53621 U8.22-201ENST00000459141 133 ntBASIC2.71□□□□□ -1.98
COPAP53621 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.71□□□□□ -1.98
COPAP53621 UBL5P4-201ENST00000562584 236 ntBASIC2.71□□□□□ -1.98
COPAP53621 AC113195.1-201ENST00000579952 141 ntBASIC2.71□□□□□ -1.98
COPAP53621 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
COPAP53621 AL356575.1-201ENST00000603008 283 ntBASIC2.71□□□□□ -1.98
COPAP53621 AL390123.1-201ENST00000603216 237 ntBASIC2.71□□□□□ -1.98
COPAP53621 AC005296.1-201ENST00000616145 209 ntBASIC2.71□□□□□ -1.98
COPAP53621 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
COPAP53621 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
COPAP53621 Y_RNA.27-201ENST00000362540 103 ntBASIC2.7□□□□□ -1.98
COPAP53621 Y_RNA.380-201ENST00000365663 111 ntBASIC2.7□□□□□ -1.98
COPAP53621 MIR10B-201ENST00000385011 110 ntBASIC2.7□□□□□ -1.98
COPAP53621 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
COPAP53621 MIR1294-201ENST00000408503 142 ntBASIC2.7□□□□□ -1.98
COPAP53621 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC2.7□□□□□ -1.98
COPAP53621 AC003685.2-201ENST00000422795 395 ntBASIC2.7□□□□□ -1.98
COPAP53621 EIF1P2-201ENST00000428233 350 ntBASIC2.7□□□□□ -1.98
COPAP53621 AC027124.2-201ENST00000428249 105 ntBASIC2.7□□□□□ -1.98
COPAP53621 CBX3P6-201ENST00000430257 527 ntBASIC2.7□□□□□ -1.98
COPAP53621 AC096638.1-201ENST00000444678 216 ntBASIC2.7□□□□□ -1.98
COPAP53621 AL513328.1-201ENST00000446460 224 ntBASIC2.7□□□□□ -1.98
COPAP53621 AC007215.1-201ENST00000464893 276 ntBASIC2.7□□□□□ -1.98
COPAP53621 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.7□□□□□ -1.98
COPAP53621 AC096725.1-201ENST00000514266 313 ntBASIC2.7□□□□□ -1.98
COPAP53621 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.7□□□□□ -1.98
COPAP53621 SNRPGP20-201ENST00000604477 205 ntBASIC2.7□□□□□ -1.98
COPAP53621 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.7□□□□□ -1.98
COPAP53621 Z82195.2-201ENST00000612348 18351 ntBASIC2.69□□□□□ -1.98
COPAP53621 Y_RNA.152-201ENST00000363578 100 ntBASIC2.69□□□□□ -1.98
COPAP53621 SNORD32B-201ENST00000364460 84 ntBASIC2.69□□□□□ -1.98
COPAP53621 SNORA63.7-201ENST00000365579 123 ntBASIC2.69□□□□□ -1.98
COPAP53621 DEFA7P-201ENST00000382676 285 ntBASIC2.69□□□□□ -1.98
COPAP53621 MIR95-201ENST00000385072 81 ntBASIC2.69□□□□□ -1.98
COPAP53621 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
COPAP53621 DPH3P2-201ENST00000422618 250 ntBASIC2.69□□□□□ -1.98
COPAP53621 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.69□□□□□ -1.98
COPAP53621 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.69□□□□□ -1.98
COPAP53621 RNA5SP148-201ENST00000516527 94 ntBASIC2.69□□□□□ -1.98
COPAP53621 Y_RNA.715-201ENST00000517082 110 ntBASIC2.69□□□□□ -1.98
COPAP53621 AP002770.2-201ENST00000543613 532 ntBASIC2.69□□□□□ -1.98
COPAP53621 AC026470.2-201ENST00000561492 181 ntBASIC2.69□□□□□ -1.98
COPAP53621 AC009127.3-201ENST00000570531 403 ntBASIC2.69□□□□□ -1.98
COPAP53621 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COPAP53621 BX322639.1-202ENST00000423987 2213 ntBASIC2.69□□□□□ -1.98
COPAP53621 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COPAP53621 RNU1-76P-201ENST00000362903 159 ntBASIC2.68□□□□□ -1.98
COPAP53621 RNU6-873P-201ENST00000363833 107 ntBASIC2.68□□□□□ -1.98
COPAP53621 SNORA25.6-201ENST00000364121 118 ntBASIC2.68□□□□□ -1.98
COPAP53621 SNORA18.2-201ENST00000383865 132 ntBASIC2.68□□□□□ -1.98
COPAP53621 RNY3P4-201ENST00000384428 101 ntBASIC2.68□□□□□ -1.98
COPAP53621 SNORA67.4-201ENST00000384688 142 ntBASIC2.68□□□□□ -1.98
COPAP53621 MIR1252-201ENST00000408861 65 ntBASIC2.68□□□□□ -1.98
COPAP53621 RNU2-32P-201ENST00000411193 191 ntBASIC2.68□□□□□ -1.98
COPAP53621 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.68□□□□□ -1.98
COPAP53621 HMGB3P3-201ENST00000510526 400 ntBASIC2.68□□□□□ -1.98
COPAP53621 MIR449C-201ENST00000516047 92 ntBASIC2.68□□□□□ -1.98
COPAP53621 RNA5SP82-201ENST00000516707 92 ntBASIC2.68□□□□□ -1.98
COPAP53621 RNU6-965P-201ENST00000516721 96 ntBASIC2.68□□□□□ -1.98
COPAP53621 SNORA48.11-201ENST00000517015 89 ntBASIC2.68□□□□□ -1.98
COPAP53621 AC093023.1-201ENST00000547375 507 ntBASIC2.68□□□□□ -1.98
COPAP53621 MIR4435-1-201ENST00000582552 80 ntBASIC2.68□□□□□ -1.98
COPAP53621 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.68□□□□□ -1.98
COPAP53621 AC005562.2-201ENST00000618264 111 ntBASIC2.68□□□□□ -1.98
COPAP53621 AL078596.1-201ENST00000624856 447 ntBASIC2.68□□□□□ -1.98
COPAP53621 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
COPAP53621 AC080100.1-201ENST00000624239 5356 ntBASIC2.68□□□□□ -1.98
COPAP53621 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
COPAP53621 RNU6-1301P-201ENST00000362724 104 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU1-23P-201ENST00000363361 144 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU6-26P-201ENST00000383985 107 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU6-546P-201ENST00000383991 107 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU6-245P-201ENST00000384020 107 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU6-708P-201ENST00000384217 107 ntBASIC2.67□□□□□ -1.98
COPAP53621 MIR561-201ENST00000385216 97 ntBASIC2.67□□□□□ -1.98
COPAP53621 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
COPAP53621 SNORD78.2-201ENST00000391076 69 ntBASIC2.67□□□□□ -1.98
COPAP53621 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC2.67□□□□□ -1.98
COPAP53621 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.67□□□□□ -1.98
COPAP53621 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.67□□□□□ -1.98
COPAP53621 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.67□□□□□ -1.98
COPAP53621 RNA5SP282-201ENST00000516355 108 ntBASIC2.67□□□□□ -1.98
COPAP53621 SNORA25.14-201ENST00000516481 132 ntBASIC2.67□□□□□ -1.98
COPAP53621 RNU6-1046P-201ENST00000516538 107 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms