Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.09□□□□□ -2.08
LBX1P52954 Y_RNA.70-201ENST00000362886 110 ntBASIC2.08□□□□□ -2.08
LBX1P52954 RNU6-1188P-201ENST00000363795 107 ntBASIC2.08□□□□□ -2.08
LBX1P52954 SNORD115-32-201ENST00000364079 82 ntBASIC2.08□□□□□ -2.08
LBX1P52954 Y_RNA.504-201ENST00000384481 104 ntBASIC2.08□□□□□ -2.08
LBX1P52954 SNORD116-29-201ENST00000384516 83 ntBASIC2.08□□□□□ -2.08
LBX1P52954 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.08□□□□□ -2.08
LBX1P52954 AL161788.1-201ENST00000441805 169 ntBASIC2.08□□□□□ -2.08
LBX1P52954 GPM6BP3-201ENST00000442797 145 ntBASIC2.08□□□□□ -2.08
LBX1P52954 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LBX1P52954 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.08□□□□□ -2.08
LBX1P52954 RNU7-152P-201ENST00000458982 64 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.08□□□□□ -2.08
LBX1P52954 APOOP3-201ENST00000536787 586 ntBASIC2.08□□□□□ -2.08
LBX1P52954 RAB11AP2-201ENST00000545905 639 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.08□□□□□ -2.08
LBX1P52954 CYP4A27P-201ENST00000567218 190 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AC009127.3-201ENST00000570531 403 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.08□□□□□ -2.08
LBX1P52954 B3GNTL1P2-201ENST00000603673 288 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AL645939.4-201ENST00000604495 135 ntBASIC2.08□□□□□ -2.08
LBX1P52954 MIR5739-201ENST00000619803 80 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AL359697.1-201ENST00000624879 587 ntBASIC2.08□□□□□ -2.08
LBX1P52954 AL008636.1-201ENST00000625038 1018 ntBASIC2.08□□□□□ -2.08
LBX1P52954 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.08□□□□□ -2.08
LBX1P52954 MTND5P9-201ENST00000503854 1755 ntBASIC2.08□□□□□ -2.08
LBX1P52954 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
LBX1P52954 snoU2_19.1-201ENST00000362361 80 ntBASIC2.07□□□□□ -2.08
LBX1P52954 Y_RNA.404-201ENST00000383978 102 ntBASIC2.07□□□□□ -2.08
LBX1P52954 RNU6-968P-201ENST00000384076 107 ntBASIC2.07□□□□□ -2.08
LBX1P52954 Y_RNA.473-201ENST00000384333 102 ntBASIC2.07□□□□□ -2.08
LBX1P52954 RNU6-790P-201ENST00000384479 105 ntBASIC2.07□□□□□ -2.08
LBX1P52954 Y_RNA.529-201ENST00000384586 119 ntBASIC2.07□□□□□ -2.08
LBX1P52954 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
LBX1P52954 AC012306.1-201ENST00000423267 114 ntBASIC2.07□□□□□ -2.08
LBX1P52954 HMGN1P33-201ENST00000432945 451 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AC010255.2-201ENST00000505209 428 ntTSL 3 BASIC2.07□□□□□ -2.08
LBX1P52954 HMGB3P3-201ENST00000510526 400 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.07□□□□□ -2.08
LBX1P52954 ACA59.1-201ENST00000515966 143 ntBASIC2.07□□□□□ -2.08
LBX1P52954 RNU6-586P-201ENST00000517265 104 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.07□□□□□ -2.08
LBX1P52954 MIR4255-201ENST00000579351 72 ntBASIC2.07□□□□□ -2.08
LBX1P52954 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.07□□□□□ -2.08
LBX1P52954 AC010928.2-201ENST00000588017 287 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AC005014.2-201ENST00000607795 599 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AC009229.3-201ENST00000608056 282 ntBASIC2.07□□□□□ -2.08
LBX1P52954 PCGEM1.1-201ENST00000613431 131 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AL157834.3-201ENST00000615543 103 ntBASIC2.07□□□□□ -2.08
LBX1P52954 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC2.07□□□□□ -2.08
LBX1P52954 AL132822.1-201ENST00000617063 513 ntBASIC2.07□□□□□ -2.08
LBX1P52954 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC2.07□□□□□ -2.08
LBX1P52954 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
LBX1P52954 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.06□□□□□ -2.08
LBX1P52954 MIR96-201ENST00000362288 78 ntBASIC2.06□□□□□ -2.08
LBX1P52954 SNORD115-8-201ENST00000363856 82 ntBASIC2.06□□□□□ -2.08
LBX1P52954 RNU6-595P-201ENST00000363944 107 ntBASIC2.06□□□□□ -2.08
LBX1P52954 SNORA38-201ENST00000363946 132 ntBASIC2.06□□□□□ -2.08
LBX1P52954 SNORD115-38-201ENST00000365037 82 ntBASIC2.06□□□□□ -2.08
LBX1P52954 RNA5SP240-201ENST00000365355 128 ntBASIC2.06□□□□□ -2.08
LBX1P52954 Y_RNA.490-201ENST00000384413 102 ntBASIC2.06□□□□□ -2.08
LBX1P52954 RNU1-148P-201ENST00000384472 162 ntBASIC2.06□□□□□ -2.08
LBX1P52954 MIR144-201ENST00000384886 86 ntBASIC2.06□□□□□ -2.08
LBX1P52954 RNU6-1050P-201ENST00000410388 107 ntBASIC2.06□□□□□ -2.08
LBX1P52954 SRIP3-201ENST00000413200 219 ntBASIC2.06□□□□□ -2.08
LBX1P52954 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.06□□□□□ -2.08
LBX1P52954 AF228730.4-201ENST00000421457 183 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AL139109.1-201ENST00000455491 297 ntBASIC2.06□□□□□ -2.08
LBX1P52954 CYP2C59P-201ENST00000457790 269 ntBASIC2.06□□□□□ -2.08
LBX1P52954 RPL23AP75-201ENST00000491601 451 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AC145146.1-201ENST00000496370 254 ntBASIC2.06□□□□□ -2.08
LBX1P52954 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.06□□□□□ -2.08
LBX1P52954 RNU6-567P-201ENST00000516746 107 ntBASIC2.06□□□□□ -2.08
LBX1P52954 Y_RNA.708-201ENST00000516950 96 ntBASIC2.06□□□□□ -2.08
LBX1P52954 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.06□□□□□ -2.08
LBX1P52954 DEFB131C-201ENST00000528817 165 ntBASIC2.06□□□□□ -2.08
LBX1P52954 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.06□□□□□ -2.08
LBX1P52954 MIR5694-201ENST00000581190 76 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.06□□□□□ -2.08
LBX1P52954 AC008121.3-201ENST00000618726 433 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AL669831.3-213ENST00000636676 183 ntBASIC2.06□□□□□ -2.08
LBX1P52954 MIR1302-1-201ENST00000637932 143 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AC112487.2-201ENST00000637950 304 ntBASIC2.06□□□□□ -2.08
LBX1P52954 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.06□□□□□ -2.08
LBX1P52954 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LBX1P52954 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
LBX1P52954 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
LBX1P52954 ZNF299P-201ENST00000406845 1804 ntBASIC2.05□□□□□ -2.08
LBX1P52954 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
LBX1P52954 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
LBX1P52954 RNU1-42P-201ENST00000364033 160 ntBASIC2.05□□□□□ -2.08
LBX1P52954 RNU5E-4P-201ENST00000364931 120 ntBASIC2.05□□□□□ -2.08
LBX1P52954 RNU6-867P-201ENST00000364956 107 ntBASIC2.05□□□□□ -2.08
LBX1P52954 Y_RNA.509-201ENST00000384506 99 ntBASIC2.05□□□□□ -2.08
LBX1P52954 Y_RNA.533-201ENST00000384596 114 ntBASIC2.05□□□□□ -2.08
LBX1P52954 HMGB3P2-201ENST00000411913 584 ntBASIC2.05□□□□□ -2.08
LBX1P52954 CBX3P6-201ENST00000430257 527 ntBASIC2.05□□□□□ -2.08
LBX1P52954 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.05□□□□□ -2.08
LBX1P52954 FO393415.2-201ENST00000480085 343 ntBASIC2.05□□□□□ -2.08
LBX1P52954 RPL30P10-201ENST00000488148 337 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms