Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 RNU6-1309P-201ENST00000363305 108 ntBASIC2.2□□□□□ -2.06
CLK1P49759 SNORD114-30-201ENST00000364448 72 ntBASIC2.2□□□□□ -2.06
CLK1P49759 Y_RNA.314-201ENST00000365114 102 ntBASIC2.2□□□□□ -2.06
CLK1P49759 MIR518C-201ENST00000384822 101 ntBASIC2.2□□□□□ -2.06
CLK1P49759 RNA5SP494-201ENST00000410653 129 ntBASIC2.2□□□□□ -2.06
CLK1P49759 RNU2-32P-201ENST00000411193 191 ntBASIC2.2□□□□□ -2.06
CLK1P49759 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.2□□□□□ -2.06
CLK1P49759 MTCO3P29-201ENST00000432119 779 ntBASIC2.2□□□□□ -2.06
CLK1P49759 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.2□□□□□ -2.06
CLK1P49759 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.2□□□□□ -2.06
CLK1P49759 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.2□□□□□ -2.06
CLK1P49759 AC023442.1-201ENST00000531247 422 ntBASIC2.2□□□□□ -2.06
CLK1P49759 U1.36-201ENST00000620684 176 ntBASIC2.2□□□□□ -2.06
CLK1P49759 TTK-211ENST00000627129 240 ntTSL 5 BASIC2.2□□□□□ -2.06
CLK1P49759 SNORA43.4-201ENST00000629559 138 ntBASIC2.2□□□□□ -2.06
CLK1P49759 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
CLK1P49759 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CLK1P49759 Y_RNA.39-201ENST00000362620 98 ntBASIC2.19□□□□□ -2.06
CLK1P49759 Y_RNA.106-201ENST00000363189 100 ntBASIC2.19□□□□□ -2.06
CLK1P49759 Y_RNA.144-201ENST00000363521 113 ntBASIC2.19□□□□□ -2.06
CLK1P49759 RNU6-1210P-201ENST00000363775 107 ntBASIC2.19□□□□□ -2.06
CLK1P49759 Y_RNA.455-201ENST00000384230 98 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MIR568-201ENST00000385036 95 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MIR29B2-201ENST00000385055 81 ntBASIC2.19□□□□□ -2.06
CLK1P49759 RNU6-823P-201ENST00000391042 103 ntBASIC2.19□□□□□ -2.06
CLK1P49759 Y_RNA.605-201ENST00000410577 105 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.19□□□□□ -2.06
CLK1P49759 AL358453.1-201ENST00000422522 250 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC096644.2-201ENST00000429278 159 ntBASIC2.19□□□□□ -2.06
CLK1P49759 CEP57L1P1-201ENST00000430943 1201 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AL591043.1-201ENST00000432461 424 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.19□□□□□ -2.06
CLK1P49759 U8.20-201ENST00000459445 131 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MTATP8P1-201ENST00000467115 207 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.19□□□□□ -2.06
CLK1P49759 HMGB3P17-201ENST00000504195 649 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.19□□□□□ -2.06
CLK1P49759 RNU2-44P-201ENST00000516795 194 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MRPS36P4-201ENST00000534436 298 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MIR5188-201ENST00000583467 113 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC006023.1-201ENST00000603944 259 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC067747.1-201ENST00000608026 250 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC007792.1-201ENST00000623023 402 ntBASIC2.19□□□□□ -2.06
CLK1P49759 MIR1291-201ENST00000627649 87 ntBASIC2.19□□□□□ -2.06
CLK1P49759 AC233981.2-201ENST00000611524 1614 ntBASIC2.18□□□□□ -2.06
CLK1P49759 SNORD115-3-201ENST00000363100 82 ntBASIC2.18□□□□□ -2.06
CLK1P49759 RNU6-450P-201ENST00000364654 107 ntBASIC2.18□□□□□ -2.06
CLK1P49759 RNU6-26P-201ENST00000383985 107 ntBASIC2.18□□□□□ -2.06
CLK1P49759 RNU6-622P-201ENST00000384272 103 ntBASIC2.18□□□□□ -2.06
CLK1P49759 SNORA8-201ENST00000384574 139 ntBASIC2.18□□□□□ -2.06
CLK1P49759 Y_RNA.557-201ENST00000384680 107 ntBASIC2.18□□□□□ -2.06
CLK1P49759 RNA5SP390-201ENST00000410191 113 ntBASIC2.18□□□□□ -2.06
CLK1P49759 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.18□□□□□ -2.06
CLK1P49759 MTCYBP10-201ENST00000424905 650 ntBASIC2.18□□□□□ -2.06
CLK1P49759 Z82188.1-201ENST00000436709 154 ntBASIC2.18□□□□□ -2.06
CLK1P49759 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC2.18□□□□□ -2.06
CLK1P49759 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CLK1P49759 AL513124.1-201ENST00000450410 614 ntBASIC2.18□□□□□ -2.06
CLK1P49759 RPL30P1-201ENST00000488676 339 ntBASIC2.18□□□□□ -2.06
CLK1P49759 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC2.18□□□□□ -2.06
CLK1P49759 RNU7-4P-201ENST00000516961 62 ntBASIC2.18□□□□□ -2.06
CLK1P49759 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.18□□□□□ -2.06
CLK1P49759 AC010928.2-201ENST00000588017 287 ntBASIC2.18□□□□□ -2.06
CLK1P49759 AL450472.1-202ENST00000637286 180 ntBASIC2.18□□□□□ -2.06
CLK1P49759 ZNF72P-201ENST00000425869 1908 ntBASIC2.18□□□□□ -2.06
CLK1P49759 AC009541.1-201ENST00000438279 2662 ntBASIC2.17□□□□□ -2.06
CLK1P49759 RNU6-1286P-201ENST00000383871 107 ntBASIC2.17□□□□□ -2.06
CLK1P49759 SNORA12.2-201ENST00000391040 156 ntBASIC2.17□□□□□ -2.06
CLK1P49759 BTF3L4P2-201ENST00000392798 346 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AC092423.1-201ENST00000430165 186 ntBASIC2.17□□□□□ -2.06
CLK1P49759 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC2.17□□□□□ -2.06
CLK1P49759 AC010655.3-201ENST00000478818 450 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AF186996.7-201ENST00000492781 209 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AC015911.1-201ENST00000495111 156 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AC008413.1-201ENST00000511864 177 ntBASIC2.17□□□□□ -2.06
CLK1P49759 SNORA40.14-201ENST00000516543 86 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AL590705.4-201ENST00000532209 134 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AC104581.2-201ENST00000572227 430 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AC090897.2-201ENST00000581715 130 ntBASIC2.17□□□□□ -2.06
CLK1P49759 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.17□□□□□ -2.06
CLK1P49759 SCARNA4-201ENST00000629045 128 ntBASIC2.17□□□□□ -2.06
CLK1P49759 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.17□□□□□ -2.06
CLK1P49759 AL136360.1-201ENST00000503377 1900 ntBASIC2.17□□□□□ -2.06
CLK1P49759 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.17□□□□□ -2.06
CLK1P49759 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CLK1P49759 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CLK1P49759 Y_RNA.405-201ENST00000383979 100 ntBASIC2.16□□□□□ -2.06
CLK1P49759 Y_RNA.451-201ENST00000384200 100 ntBASIC2.16□□□□□ -2.06
CLK1P49759 RNU6-574P-201ENST00000384265 107 ntBASIC2.16□□□□□ -2.06
CLK1P49759 RNU6-463P-201ENST00000384340 107 ntBASIC2.16□□□□□ -2.06
CLK1P49759 Y_RNA.524-201ENST00000384564 100 ntBASIC2.16□□□□□ -2.06
CLK1P49759 Y_RNA.561-201ENST00000384694 100 ntBASIC2.16□□□□□ -2.06
CLK1P49759 MIR625-201ENST00000385047 85 ntBASIC2.16□□□□□ -2.06
CLK1P49759 RNU6-700P-201ENST00000391043 107 ntBASIC2.16□□□□□ -2.06
CLK1P49759 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CLK1P49759 Y_RNA.592-201ENST00000410274 109 ntBASIC2.16□□□□□ -2.06
CLK1P49759 RN7SKP284-201ENST00000411002 343 ntBASIC2.16□□□□□ -2.06
CLK1P49759 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC2.16□□□□□ -2.06
CLK1P49759 MTCYBP9-201ENST00000431021 303 ntBASIC2.16□□□□□ -2.06
CLK1P49759 RN7SKP210-201ENST00000459176 261 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 117.5 ms