Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 MIR1244-2-201ENST00000636449 85 ntBASIC2.67□□□□□ -1.98
TM4SF4P48230 MIR1244-4-202ENST00000636813 85 ntBASIC2.67□□□□□ -1.98
TM4SF4P48230 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC2.67□□□□□ -1.98
TM4SF4P48230 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TM4SF4P48230 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
TM4SF4P48230 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.66□□□□□ -1.98
TM4SF4P48230 RNU1-76P-201ENST00000362903 159 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 RNU1-17P-201ENST00000363022 152 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 Y_RNA.428-201ENST00000384078 102 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 MIR300-201ENST00000401138 83 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC2.66□□□□□ -1.98
TM4SF4P48230 RPL39P40-201ENST00000445481 146 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 PRELID3BP1-201ENST00000457142 540 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 AC114982.1-201ENST00000469402 321 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.66□□□□□ -1.98
TM4SF4P48230 AC108729.3-201ENST00000513484 108 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 RNU6-1098P-201ENST00000516772 96 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 MIR5695-201ENST00000579717 85 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 MIR4753-201ENST00000585119 83 ntBASIC2.66□□□□□ -1.98
TM4SF4P48230 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
TM4SF4P48230 MTND5P16-201ENST00000460269 1703 ntBASIC2.65□□□□□ -1.98
TM4SF4P48230 Y_RNA.106-201ENST00000363189 100 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 Y_RNA.132-201ENST00000363421 102 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 Y_RNA.314-201ENST00000365114 102 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 SNORA40.19-201ENST00000390846 128 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 RNU6-159P-201ENST00000391080 106 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 Y_RNA.605-201ENST00000410577 105 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.65□□□□□ -1.99
TM4SF4P48230 MTCO3P8-201ENST00000453691 755 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC2.65□□□□□ -1.99
TM4SF4P48230 AC090617.3-201ENST00000573670 475 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 AL133255.1-201ENST00000606374 441 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.65□□□□□ -1.99
TM4SF4P48230 AC067747.1-201ENST00000608026 250 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 AC005296.1-201ENST00000616145 209 ntBASIC2.65□□□□□ -1.99
TM4SF4P48230 ZNF271P-202ENST00000465539 1970 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.64□□□□□ -1.99
TM4SF4P48230 Y_RNA.99-201ENST00000363138 105 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 RNU6-873P-201ENST00000363833 107 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORD31B-201ENST00000364977 69 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORA80E-201ENST00000384744 137 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 MIR487A-201ENST00000385009 80 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 MIR628-201ENST00000385229 95 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 MIR29C-201ENST00000385231 88 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORA69.1-201ENST00000390904 137 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 AL023284.1-201ENST00000403956 276 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 RNU6-1156P-201ENST00000410365 100 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.64□□□□□ -1.99
TM4SF4P48230 AC114482.1-201ENST00000418010 247 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 CYCSP49-201ENST00000420810 319 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 HMGN1P13-201ENST00000505795 138 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 AC093259.1-201ENST00000509755 300 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.64□□□□□ -1.99
TM4SF4P48230 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.64□□□□□ -1.99
TM4SF4P48230 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC2.64□□□□□ -1.99
TM4SF4P48230 MIR4781-201ENST00000585250 76 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORD14A-201ENST00000606526 91 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORD11B-201ENST00000607707 90 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 AC073544.1-201ENST00000600110 1595 ntBASIC2.64□□□□□ -1.99
TM4SF4P48230 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
TM4SF4P48230 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.64□□□□□ -1.99
TM4SF4P48230 SNORD14D-201ENST00000384390 87 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 Y_RNA.509-201ENST00000384506 99 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 MIR549A-201ENST00000385268 96 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 RNU1-139P-201ENST00000391307 165 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 WARS2P1-201ENST00000429678 537 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC2.63□□□□□ -1.99
TM4SF4P48230 HMGN2P18-201ENST00000450680 270 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 AC011753.1-201ENST00000451001 220 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.63□□□□□ -1.99
TM4SF4P48230 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.63□□□□□ -1.99
TM4SF4P48230 Y_RNA.661-201ENST00000516003 99 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 RNU6-976P-201ENST00000516086 111 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 RNA5SP137-201ENST00000516833 135 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 SNORD116.3-201ENST00000517176 78 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 MIR2355-201ENST00000517199 87 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.63□□□□□ -1.99
TM4SF4P48230 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.63□□□□□ -1.99
TM4SF4P48230 AL049779.4-201ENST00000604500 156 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 AC090971.5-201ENST00000621102 293 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 AC130454.1-201ENST00000622948 401 ntBASIC2.63□□□□□ -1.99
TM4SF4P48230 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.63□□□□□ -1.99
TM4SF4P48230 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
TM4SF4P48230 RNU6-222P-201ENST00000362438 107 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 RNU1-62P-201ENST00000362599 164 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 SNORD115-3-201ENST00000363100 82 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 Y_RNA.179-201ENST00000363844 90 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 SNORA51.4-201ENST00000364993 124 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 Y_RNA.358-201ENST00000365491 99 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 RNU6-793P-201ENST00000384233 104 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 MIR221-201ENST00000385135 110 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 Y_RNA.579-201ENST00000390939 94 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 RNU2-48P-201ENST00000410694 191 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 RPS20P15-201ENST00000412792 311 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 AL445305.1-201ENST00000432577 575 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 AC244505.4-201ENST00000434905 287 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 SSXP5-201ENST00000443473 287 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 RNU6-344P-201ENST00000516635 111 ntBASIC2.62□□□□□ -1.99
TM4SF4P48230 UBL5P4-201ENST00000562584 236 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms