Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC2.09□□□□□ -2.07
HNF4AP41235 AL078605.1-201ENST00000603529 500 ntBASIC2.09□□□□□ -2.07
HNF4AP41235 MIR1302-2-201ENST00000607096 138 ntBASIC2.09□□□□□ -2.07
HNF4AP41235 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.09□□□□□ -2.07
HNF4AP41235 AL590808.1-201ENST00000618696 141 ntBASIC2.09□□□□□ -2.07
HNF4AP41235 AP000553.5-201ENST00000641933 54 ntBASIC2.09□□□□□ -2.07
HNF4AP41235 ZNF299P-201ENST00000406845 1804 ntBASIC2.09□□□□□ -2.08
HNF4AP41235 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
HNF4AP41235 Y_RNA.112-201ENST00000363250 102 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RNU6-1286P-201ENST00000383871 107 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 Y_RNA.445-201ENST00000384168 102 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 SNORA29-201ENST00000384183 140 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RNU11-3P-201ENST00000391111 133 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 MIR548P-201ENST00000408336 84 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 SNORA11.4-201ENST00000408823 129 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RN7SKP61-201ENST00000410642 295 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RNA5SP494-201ENST00000410653 129 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC018865.2-201ENST00000423631 129 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 HMGN2P3-201ENST00000433603 273 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC244670.1-201ENST00000436879 112 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 HMGN2P5-201ENST00000436882 273 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AL513124.1-201ENST00000450410 614 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RPL23AP75-201ENST00000491601 451 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RNU6-307P-201ENST00000516743 106 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 RNU6-264P-201ENST00000517134 104 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AP003072.1-201ENST00000531740 145 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AP002770.2-201ENST00000543613 532 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.08□□□□□ -2.08
HNF4AP41235 SUB1P3-201ENST00000564581 315 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 MIR5701-3-201ENST00000578890 82 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 MIR5701-1-201ENST00000585138 82 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC010928.2-201ENST00000588017 287 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AL034555.1-201ENST00000604816 211 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.08□□□□□ -2.08
HNF4AP41235 MIR5701-2-201ENST00000615634 82 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 U1.36-201ENST00000620684 176 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC064859.1-201ENST00000624741 174 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 AC233981.2-201ENST00000611524 1614 ntBASIC2.08□□□□□ -2.08
HNF4AP41235 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.08□□□□□ -2.08
HNF4AP41235 RNU1-58P-201ENST00000362413 163 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 Y_RNA.326-201ENST00000365176 113 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HNF4AP41235 RNA5SP212-201ENST00000391223 107 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 SNORA3.2-201ENST00000408221 125 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
HNF4AP41235 AC078809.1-201ENST00000427601 140 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 MTCO3P29-201ENST00000432119 779 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.07□□□□□ -2.08
HNF4AP41235 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.07□□□□□ -2.08
HNF4AP41235 AL163540.1-201ENST00000485382 386 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 AF186996.7-201ENST00000492781 209 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 RNU6-976P-201ENST00000516086 111 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 SNORA31.16-201ENST00000516773 139 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 Y_RNA.711-201ENST00000516993 102 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.07□□□□□ -2.08
HNF4AP41235 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC2.07□□□□□ -2.08
HNF4AP41235 MIR3136-201ENST00000583498 78 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 AC091925.1-201ENST00000623204 462 ntBASIC2.07□□□□□ -2.08
HNF4AP41235 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC2.07□□□□□ -2.08
HNF4AP41235 RNU6-874P-201ENST00000362390 105 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 RNU5B-2P-201ENST00000363036 113 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 RNU6-1164P-201ENST00000364428 107 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 Y_RNA.252-201ENST00000364556 101 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 SNORA22B-201ENST00000383876 138 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 RNU6-968P-201ENST00000384076 107 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 MIR1294-201ENST00000408503 142 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 RNU6-1156P-201ENST00000410365 100 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 EIF1AXP1-201ENST00000419267 435 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.06□□□□□ -2.08
HNF4AP41235 AL358453.1-201ENST00000422522 250 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AL356320.1-201ENST00000429616 163 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AL035666.1-201ENST00000446195 348 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AL353705.4-201ENST00000449661 238 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC2.06□□□□□ -2.08
HNF4AP41235 TRBV12-1-201ENST00000479785 344 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AC016632.1-201ENST00000503994 196 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AC116563.1-201ENST00000505454 396 ntTSL 3 BASIC2.06□□□□□ -2.08
HNF4AP41235 AC105758.1-201ENST00000506038 399 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AC093259.1-201ENST00000509755 300 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.06□□□□□ -2.08
HNF4AP41235 Y_RNA.661-201ENST00000516003 99 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AP005660.1-201ENST00000522972 293 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.06□□□□□ -2.08
HNF4AP41235 AC091544.4-201ENST00000555268 342 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.06□□□□□ -2.08
HNF4AP41235 AC002984.1-201ENST00000591692 448 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 DSCR8-208ENST00000614538 403 ntAPPRIS P5 TSL 5 BASIC2.06□□□□□ -2.08
HNF4AP41235 AP000560.1-201ENST00000624150 1937 ntBASIC2.06□□□□□ -2.08
HNF4AP41235 Y_RNA.28-201ENST00000362554 111 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 Y_RNA.405-201ENST00000383979 100 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 Y_RNA.451-201ENST00000384200 100 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 SNORA67.3-201ENST00000384366 140 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 RNY1P14-201ENST00000384426 108 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 Y_RNA.524-201ENST00000384564 100 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 Y_RNA.561-201ENST00000384694 100 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 Y_RNA.577-201ENST00000384794 101 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 SNORA26.3-201ENST00000391119 136 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 AL033519.2-201ENST00000403958 392 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 AL135786.1-201ENST00000415892 214 ntBASIC2.05□□□□□ -2.08
HNF4AP41235 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms