Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 HMGN2P9-201ENST00000476875 229 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RPL30P7-201ENST00000479312 323 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 MTCO1P29-201ENST00000496868 288 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 AC079140.2-201ENST00000506193 142 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RNU2-34P-201ENST00000516534 121 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RAB11AP2-201ENST00000545905 639 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RRN3P3-201ENST00000549207 578 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 DNAJC19P9-201ENST00000555084 351 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 Z99129.1-201ENST00000612510 255 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 AC073534.2-201ENST00000620377 381 ntBASIC1.26□□□□□ -2.21
FDFT1P37268 MPP6-209ENST00000625307 126 ntTSL 5 BASIC1.26□□□□□ -2.21
FDFT1P37268 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.26□□□□□ -2.21
FDFT1P37268 BX322639.1-202ENST00000423987 2213 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.25□□□□□ -2.21
FDFT1P37268 Y_RNA.167-201ENST00000363735 109 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 MIR514A2-201ENST00000385131 88 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 MIR514A3-201ENST00000385132 88 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 MIR450B-201ENST00000401182 78 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AL117342.1-201ENST00000404861 406 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 RNU2-66P-201ENST00000410650 161 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 USP9YP14-201ENST00000430663 563 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 MTCO3P29-201ENST00000432119 779 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.25□□□□□ -2.21
FDFT1P37268 MTCO3P8-201ENST00000453691 755 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AC114982.1-201ENST00000469402 321 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AC083904.1-201ENST00000487828 231 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 RN7SKP179-201ENST00000516126 217 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 RNU6-948P-201ENST00000516374 107 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AC090821.2-201ENST00000523552 176 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.25□□□□□ -2.21
FDFT1P37268 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.25□□□□□ -2.21
FDFT1P37268 AL512360.1-201ENST00000555346 234 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AC146944.4-201ENST00000602697 718 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 BNIP3P10-201ENST00000605360 577 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 AL050343.2-201ENST00000607338 280 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 MIR8076-201ENST00000611401 83 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.25□□□□□ -2.21
FDFT1P37268 AC124864.2-201ENST00000624736 186 ntBASIC1.25□□□□□ -2.21
FDFT1P37268 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.25□□□□□ -2.21
FDFT1P37268 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
FDFT1P37268 MIR26B-201ENST00000362251 77 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 Y_RNA.231-201ENST00000364358 102 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 SNORD116-1-201ENST00000384335 95 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 CALM2P3-201ENST00000400429 449 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 RNU6-1068P-201ENST00000410958 103 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC009237.7-201ENST00000447357 229 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 NFU1P2-201ENST00000448700 469 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.24□□□□□ -2.21
FDFT1P37268 OR2AQ1P-201ENST00000451972 200 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AF186996.7-201ENST00000492781 209 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC107401.1-201ENST00000503426 685 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.24□□□□□ -2.21
FDFT1P37268 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 Y_RNA.693-201ENST00000516641 110 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.24□□□□□ -2.21
FDFT1P37268 MTND1P35-201ENST00000526739 508 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC1.24□□□□□ -2.21
FDFT1P37268 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
FDFT1P37268 AC026371.1-201ENST00000551867 419 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC015688.6-201ENST00000577737 104 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 CPDP1-201ENST00000579660 283 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC100830.2-201ENST00000581636 240 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC023043.2-201ENST00000589678 1026 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AC073413.2-201ENST00000604332 360 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AL353149.1-201ENST00000610667 244 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 FAM157A-202ENST00000615155 405 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 AL359880.1-201ENST00000621879 266 ntBASIC1.24□□□□□ -2.21
FDFT1P37268 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
FDFT1P37268 OR4G1P-203ENST00000641984 1631 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 Y_RNA.51-201ENST00000362725 102 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 RNU6-1305P-201ENST00000364353 104 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 RNU6-1235P-201ENST00000384559 107 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 RNU6-331P-201ENST00000384724 107 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
FDFT1P37268 RNU4-62P-201ENST00000410125 130 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AC004866.1-201ENST00000411748 78 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC1.23□□□□□ -2.21
FDFT1P37268 EIF1P1-201ENST00000421436 341 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 CST2P1-201ENST00000425770 87 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AC108667.1-201ENST00000428618 249 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.23□□□□□ -2.21
FDFT1P37268 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.23□□□□□ -2.21
FDFT1P37268 RNU6-498P-201ENST00000459468 107 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.23□□□□□ -2.21
FDFT1P37268 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC1.23□□□□□ -2.21
FDFT1P37268 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.23□□□□□ -2.21
FDFT1P37268 SNRPGP20-201ENST00000604477 205 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 RNU6-89P-201ENST00000606519 100 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AL078604.3-201ENST00000615580 211 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 AC095038.3-201ENST00000634439 195 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 MIR338-201ENST00000636369 67 ntBASIC1.23□□□□□ -2.21
FDFT1P37268 MTND4P5-201ENST00000435821 1374 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 AC121333.1-201ENST00000567488 2709 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 RNU6-522P-201ENST00000364497 107 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 RNU6-975P-201ENST00000384296 105 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 RNU6-784P-201ENST00000384330 106 ntBASIC1.22□□□□□ -2.21
FDFT1P37268 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.22□□□□□ -2.21
FDFT1P37268 SNRPEP10-201ENST00000420249 274 ntBASIC1.22□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 157.2 ms