Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PIGFP2-201ENST00000421400 651 ntBASIC0.69□□□□□ -2.3
RPA3P35244 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.69□□□□□ -2.3
RPA3P35244 AC005002.2-201ENST00000438228 269 ntBASIC0.69□□□□□ -2.3
RPA3P35244 AC009237.7-201ENST00000447357 229 ntBASIC0.69□□□□□ -2.3
RPA3P35244 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC0.69□□□□□ -2.3
RPA3P35244 HSFY5P-201ENST00000453726 309 ntBASIC0.69□□□□□ -2.3
RPA3P35244 AL033528.1-201ENST00000453780 140 ntBASIC0.69□□□□□ -2.3
RPA3P35244 SNRPFP3-201ENST00000457792 225 ntBASIC0.69□□□□□ -2.3
RPA3P35244 RNU7-57P-201ENST00000459540 60 ntBASIC0.69□□□□□ -2.3
RPA3P35244 PDCD5P2-201ENST00000507570 312 ntBASIC0.69□□□□□ -2.3
RPA3P35244 RNU6-197P-201ENST00000516680 100 ntBASIC0.69□□□□□ -2.3
RPA3P35244 AC106038.2-201ENST00000520706 568 ntBASIC0.69□□□□□ -2.3
RPA3P35244 AL391840.1-201ENST00000571144 367 ntBASIC0.69□□□□□ -2.3
RPA3P35244 MTATP6P3-201ENST00000581686 676 ntBASIC0.69□□□□□ -2.3
RPA3P35244 AC090616.2-202ENST00000584248 222 ntBASIC0.69□□□□□ -2.3
RPA3P35244 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC0.69□□□□□ -2.3
RPA3P35244 U6.108-201ENST00000637764 58 ntBASIC0.69□□□□□ -2.3
RPA3P35244 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC0.69□□□□□ -2.3
RPA3P35244 RNU5B-2P-201ENST00000363036 113 ntBASIC0.68□□□□□ -2.3
RPA3P35244 Y_RNA.238-201ENST00000364441 102 ntBASIC0.68□□□□□ -2.3
RPA3P35244 SNORD114-24-201ENST00000365029 72 ntBASIC0.68□□□□□ -2.3
RPA3P35244 RNU6-17P-201ENST00000384245 107 ntBASIC0.68□□□□□ -2.3
RPA3P35244 RNU6-18P-201ENST00000384527 107 ntBASIC0.68□□□□□ -2.3
RPA3P35244 RNU6-297P-201ENST00000384636 107 ntBASIC0.68□□□□□ -2.3
RPA3P35244 RNA5SP494-201ENST00000410653 129 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC0.68□□□□□ -2.3
RPA3P35244 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC0.68□□□□□ -2.3
RPA3P35244 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.68□□□□□ -2.3
RPA3P35244 CETN4P-201ENST00000432407 469 ntBASIC0.68□□□□□ -2.3
RPA3P35244 RPS4XP11-201ENST00000446897 772 ntBASIC0.68□□□□□ -2.3
RPA3P35244 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC0.68□□□□□ -2.3
RPA3P35244 RPS29P27-201ENST00000463711 170 ntBASIC0.68□□□□□ -2.3
RPA3P35244 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC0.68□□□□□ -2.3
RPA3P35244 AC117454.1-201ENST00000491120 168 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.68□□□□□ -2.3
RPA3P35244 RNU1-142P-201ENST00000516682 145 ntBASIC0.68□□□□□ -2.3
RPA3P35244 SNORA18.6-201ENST00000516792 115 ntBASIC0.68□□□□□ -2.3
RPA3P35244 MTND2P32-201ENST00000521584 1038 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.68□□□□□ -2.3
RPA3P35244 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC0.68□□□□□ -2.3
RPA3P35244 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC0.68□□□□□ -2.3
RPA3P35244 AC016256.1-201ENST00000547971 354 ntBASIC0.68□□□□□ -2.3
RPA3P35244 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC0.68□□□□□ -2.3
RPA3P35244 MIR3941-201ENST00000582572 103 ntBASIC0.68□□□□□ -2.3
RPA3P35244 BNIP3P39-201ENST00000601077 554 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC146944.4-201ENST00000602697 718 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC245014.2-201ENST00000603689 287 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC011458.1-201ENST00000604034 617 ntBASIC0.68□□□□□ -2.3
RPA3P35244 AC246785.4-201ENST00000605374 287 ntBASIC0.68□□□□□ -2.3
RPA3P35244 U2.17-201ENST00000611454 95 ntBASIC0.68□□□□□ -2.3
RPA3P35244 MIR8054-201ENST00000620877 86 ntBASIC0.68□□□□□ -2.3
RPA3P35244 GAGE12B-201ENST00000361446 117 ntAPPRIS P1 BASIC0.67□□□□□ -2.3
RPA3P35244 RNU6-227P-201ENST00000362865 103 ntBASIC0.67□□□□□ -2.3
RPA3P35244 Y_RNA.363-201ENST00000365529 113 ntBASIC0.67□□□□□ -2.3
RPA3P35244 MIR508-201ENST00000384857 115 ntBASIC0.67□□□□□ -2.3
RPA3P35244 SNORA12.1-201ENST00000390873 148 ntBASIC0.67□□□□□ -2.3
RPA3P35244 RNU2-29P-201ENST00000410423 189 ntBASIC0.67□□□□□ -2.3
RPA3P35244 RN7SKP200-201ENST00000410564 320 ntBASIC0.67□□□□□ -2.3
RPA3P35244 RNU6-1054P-201ENST00000411293 104 ntBASIC0.67□□□□□ -2.3
RPA3P35244 RNU2-64P-201ENST00000411315 191 ntBASIC0.67□□□□□ -2.3
RPA3P35244 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.67□□□□□ -2.3
RPA3P35244 AL606490.4-201ENST00000423117 127 ntBASIC0.67□□□□□ -2.3
RPA3P35244 MTND3P9-201ENST00000429526 346 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC0.67□□□□□ -2.3
RPA3P35244 AC022364.2-201ENST00000457963 554 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AC105758.1-201ENST00000506038 399 ntBASIC0.67□□□□□ -2.3
RPA3P35244 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.67□□□□□ -2.3
RPA3P35244 RNU6-1129P-201ENST00000515964 104 ntBASIC0.67□□□□□ -2.3
RPA3P35244 SNORD79.1-201ENST00000516069 84 ntBASIC0.67□□□□□ -2.3
RPA3P35244 SCARNA1-201ENST00000517138 166 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AP002963.1-201ENST00000530590 184 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.67□□□□□ -2.3
RPA3P35244 AC133485.1-201ENST00000567176 124 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AC138907.6-201ENST00000568401 126 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AL513534.2-201ENST00000603836 250 ntBASIC0.67□□□□□ -2.3
RPA3P35244 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
RPA3P35244 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.67□□□□□ -2.3
RPA3P35244 RNU6-181P-201ENST00000363225 107 ntBASIC0.66□□□□□ -2.3
RPA3P35244 RNU6-606P-201ENST00000384721 111 ntBASIC0.66□□□□□ -2.3
RPA3P35244 MIR608-201ENST00000384820 100 ntBASIC0.66□□□□□ -2.3
RPA3P35244 MIR586-201ENST00000385035 97 ntBASIC0.66□□□□□ -2.3
RPA3P35244 RNU6-1106P-201ENST00000390845 107 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.66□□□□□ -2.3
RPA3P35244 AC245047.7-201ENST00000440265 293 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC0.66□□□□□ -2.3
RPA3P35244 AC074290.1-201ENST00000448883 135 ntBASIC0.66□□□□□ -2.3
RPA3P35244 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.66□□□□□ -2.3
RPA3P35244 RNU7-125P-201ENST00000458760 62 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AC010493.1-201ENST00000513479 292 ntBASIC0.66□□□□□ -2.3
RPA3P35244 RNU6-445P-201ENST00000516949 107 ntBASIC0.66□□□□□ -2.3
RPA3P35244 DEFB108E-201ENST00000524692 240 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AL590705.4-201ENST00000532209 134 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AL137161.1-201ENST00000532231 390 ntBASIC0.66□□□□□ -2.3
RPA3P35244 MRPS36P4-201ENST00000534436 298 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AC011604.1-201ENST00000545978 196 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AL121579.1-201ENST00000555129 305 ntBASIC0.66□□□□□ -2.3
RPA3P35244 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC0.66□□□□□ -2.3
RPA3P35244 AC068790.2-201ENST00000602601 557 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AC087683.2-201ENST00000611384 326 ntBASIC0.66□□□□□ -2.3
RPA3P35244 AC016597.2-201ENST00000613256 341 ntBASIC0.66□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 157.9 ms