Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC034114.1-201ENST00000520293 285 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC2.3□□□□□ -2.04
HOXA13P31271 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC2.3□□□□□ -2.04
HOXA13P31271 AC090517.1-201ENST00000569307 266 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC026271.5-201ENST00000577873 130 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.3□□□□□ -2.04
HOXA13P31271 MIR1302-2-201ENST00000607096 138 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 PCGEM1.1-201ENST00000613431 131 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC022202.1-201ENST00000613515 211 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC040896.1-201ENST00000613819 479 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC245884.12-201ENST00000615364 59 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 AC134503.1-201ENST00000633048 54 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 MTND5P10-201ENST00000603719 1809 ntBASIC2.3□□□□□ -2.04
HOXA13P31271 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HOXA13P31271 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HOXA13P31271 MTND4P1-201ENST00000457501 1466 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 RNU6-874P-201ENST00000362390 105 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 SNORA3A-201ENST00000364113 130 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 SNORA22B-201ENST00000383876 138 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 MIR487A-201ENST00000385009 80 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 MIR764-201ENST00000390811 85 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 MTCYBP2-201ENST00000407745 171 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 AC005534.2-201ENST00000431047 433 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 Z82188.1-201ENST00000436709 154 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 CHEK2P4-201ENST00000450340 246 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 Y_RNA.631-201ENST00000459607 101 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA13P31271 AC107032.1-201ENST00000485945 480 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 RNU6-470P-201ENST00000515954 104 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.29□□□□□ -2.04
HOXA13P31271 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA13P31271 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC2.29□□□□□ -2.04
HOXA13P31271 AC016256.1-201ENST00000547971 354 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 MIR5089-201ENST00000580047 84 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 AL031274.2-201ENST00000599419 203 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 7SK.7-201ENST00000603504 247 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.29□□□□□ -2.04
HOXA13P31271 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
HOXA13P31271 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXA13P31271 MTND5P9-201ENST00000503854 1755 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 RNU6-99P-201ENST00000364721 107 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 RNU6-596P-201ENST00000365395 98 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 RNU6-26P-201ENST00000383985 107 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 EDDM3CP-201ENST00000415977 425 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 AL160004.2-201ENST00000432935 350 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.28□□□□□ -2.04
HOXA13P31271 AC087477.1-201ENST00000465747 340 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 RNU6-991P-201ENST00000516168 107 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 EIF4A1P12-201ENST00000551910 141 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 AC245060.5-201ENST00000610778 3293 ntBASIC2.28□□□□□ -2.04
HOXA13P31271 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.28□□□□□ -2.05
HOXA13P31271 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC2.27□□□□□ -2.05
HOXA13P31271 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXA13P31271 AC009487.4-201ENST00000624969 3585 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 ANKRD20A9P-201ENST00000457997 2978 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 RNA5SP201-201ENST00000410316 124 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.27□□□□□ -2.05
HOXA13P31271 RPL23AP50-201ENST00000434149 455 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 AL137159.1-201ENST00000452808 512 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXA13P31271 AF186996.7-201ENST00000492781 209 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 RNU5F-4P-201ENST00000516581 114 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 RNU6-1137P-201ENST00000517073 99 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 AC018630.3-201ENST00000542637 96 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXA13P31271 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.27□□□□□ -2.05
HOXA13P31271 AC009127.3-201ENST00000570531 403 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR5696-201ENST00000578474 85 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 AC025754.2-201ENST00000606491 432 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR1244-1-201ENST00000612829 85 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR1248-201ENST00000629190 106 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR1244-3-201ENST00000635744 85 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR1244-2-201ENST00000636449 85 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 MIR1244-4-202ENST00000636813 85 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.27□□□□□ -2.05
HOXA13P31271 ZNF72P-201ENST00000425869 1908 ntBASIC2.27□□□□□ -2.05
HOXA13P31271 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.26□□□□□ -2.05
HOXA13P31271 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HOXA13P31271 Y_RNA.80-201ENST00000362996 102 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 RNY1P16-201ENST00000363063 111 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 Y_RNA.112-201ENST00000363250 102 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 SNORD32B-201ENST00000364460 84 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 RNU6-611P-201ENST00000384276 104 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 Y_RNA.485-201ENST00000384395 102 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 RNY1P14-201ENST00000384426 108 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AL358453.1-201ENST00000422522 250 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA13P31271 AC018865.2-201ENST00000423631 129 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AC096644.2-201ENST00000429278 159 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AL591806.2-201ENST00000433122 173 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 CR769767.1-201ENST00000436337 346 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 IFNA11P-201ENST00000446352 526 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AL163540.1-201ENST00000485382 386 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AC132942.1-201ENST00000486753 483 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 RPL23AP75-201ENST00000491601 451 ntBASIC2.26□□□□□ -2.05
HOXA13P31271 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC2.26□□□□□ -2.05
HOXA13P31271 SNORA31.11-201ENST00000516528 139 ntBASIC2.26□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms