Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 Y_RNA.100-201ENST00000363141 102 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 Y_RNA.123-201ENST00000363338 102 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 Y_RNA.212-201ENST00000364177 102 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 Y_RNA.269-201ENST00000364685 89 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 SNORD116-11-201ENST00000383882 92 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 RNU6-26P-201ENST00000383985 107 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 Y_RNA.573-201ENST00000384763 105 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 MIR1283-2-201ENST00000408621 87 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 Y_RNA.599-201ENST00000410489 109 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 RNU2-41P-201ENST00000410991 178 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 FCF1P9-201ENST00000412546 282 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AL590556.1-201ENST00000423231 483 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.44□□□□□ -2.18
HOXA9P31269 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXA9P31269 snoU13.6-201ENST00000458785 104 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 U8.21-201ENST00000459536 136 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 HMGN1P7-201ENST00000491722 313 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 MTCO1P29-201ENST00000496868 288 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 KRTAP13-6P-201ENST00000508999 371 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 RNU6-1088P-201ENST00000516850 104 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 RNA5SP490-201ENST00000517141 136 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXA9P31269 HMSD-204ENST00000526932 162 ntTSL 3 BASIC1.44□□□□□ -2.18
HOXA9P31269 EIF4A1P12-201ENST00000551910 141 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.44□□□□□ -2.18
HOXA9P31269 MIR3660-201ENST00000584845 100 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AC009994.1-201ENST00000606889 253 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 MIR8076-201ENST00000611401 83 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 AC027514.1-201ENST00000588561 1603 ntBASIC1.44□□□□□ -2.18
HOXA9P31269 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 MTND5P35-201ENST00000557537 1720 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 SNORD50.1-201ENST00000362987 71 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 U3.9-201ENST00000363823 204 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 Y_RNA.355-201ENST00000365462 98 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 MIR521-1-201ENST00000384902 87 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 MIR1277-201ENST00000408536 78 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 SRIP3-201ENST00000413200 219 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 EIF1P1-201ENST00000421436 341 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.43□□□□□ -2.18
HOXA9P31269 AL357134.1-201ENST00000445848 426 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.43□□□□□ -2.18
HOXA9P31269 TRBVA-201ENST00000498804 316 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 ATP5EP1-201ENST00000510257 156 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 RNU6-864P-201ENST00000516256 108 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.43□□□□□ -2.18
HOXA9P31269 AC006504.8-201ENST00000621046 635 ntBASIC1.43□□□□□ -2.18
HOXA9P31269 C1orf141-205ENST00000475209 2079 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
HOXA9P31269 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
HOXA9P31269 RNU6-562P-201ENST00000362731 107 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 Y_RNA.157-201ENST00000363638 102 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 SNORD114-6-201ENST00000364393 72 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU4-56P-201ENST00000364700 142 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU6-53P-201ENST00000365367 106 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU6-1286P-201ENST00000383871 107 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU6-784P-201ENST00000384330 106 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 SNORD14D-201ENST00000384390 87 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 Y_RNA.505-201ENST00000384489 102 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 SNORA12.2-201ENST00000391040 156 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU11-3P-201ENST00000391111 133 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNA5SP118-201ENST00000410385 109 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AC009310.1-201ENST00000414414 451 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXA9P31269 AC114801.2-201ENST00000503825 781 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNU6-1098P-201ENST00000516772 96 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 RNA5SP102-201ENST00000516865 106 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXA9P31269 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXA9P31269 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXA9P31269 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.42□□□□□ -2.18
HOXA9P31269 FGF7P1-201ENST00000582820 288 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AC146944.4-201ENST00000602697 718 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 MIR7111-201ENST00000619751 72 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AL136221.1-201ENST00000621449 509 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 AC009033.1-201ENST00000624279 431 ntBASIC1.42□□□□□ -2.18
HOXA9P31269 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.42□□□□□ -2.18
HOXA9P31269 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.42□□□□□ -2.18
HOXA9P31269 MIR340-201ENST00000362125 95 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 Y_RNA.301-201ENST00000364990 103 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
HOXA9P31269 RNU6-1093P-201ENST00000391194 107 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 MIR208B-201ENST00000401172 77 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 Y_RNA.619-201ENST00000410951 90 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 RPL30P16-201ENST00000419341 429 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXA9P31269 NFU1P2-201ENST00000448700 469 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXA9P31269 AC112492.4-201ENST00000456549 352 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 RPS29P23-201ENST00000458635 123 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 FO393415.2-201ENST00000480085 343 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AF186996.7-201ENST00000492781 209 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.41□□□□□ -2.18
HOXA9P31269 RNU6-567P-201ENST00000516746 107 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 DEFB131C-201ENST00000528817 165 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AC084364.2-201ENST00000546924 395 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AC016256.1-201ENST00000547971 354 ntBASIC1.41□□□□□ -2.18
HOXA9P31269 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC1.41□□□□□ -2.18
HOXA9P31269 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.41□□□□□ -2.18
HOXA9P31269 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms