Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 MIR6840-201ENST00000611937 71 ntBASIC1.99□□□□□ -2.09
SHC1P29353 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.99□□□□□ -2.09
SHC1P29353 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
SHC1P29353 IL33-202ENST00000417746 2327 ntTSL 2 BASIC1.99□□□□□ -2.09
SHC1P29353 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
SHC1P29353 RNU6-222P-201ENST00000362438 107 ntBASIC1.98□□□□□ -2.09
SHC1P29353 RNU6-238P-201ENST00000363313 106 ntBASIC1.98□□□□□ -2.09
SHC1P29353 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
SHC1P29353 RNU6-142P-201ENST00000384019 107 ntBASIC1.98□□□□□ -2.09
SHC1P29353 RNU6-463P-201ENST00000384340 107 ntBASIC1.98□□□□□ -2.09
SHC1P29353 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
SHC1P29353 RNA5SP213-201ENST00000391031 106 ntBASIC1.98□□□□□ -2.09
SHC1P29353 RNU6-1109P-201ENST00000391187 107 ntBASIC1.98□□□□□ -2.09
SHC1P29353 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.98□□□□□ -2.09
SHC1P29353 MIR1252-201ENST00000408861 65 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AC114482.1-201ENST00000418010 247 ntBASIC1.98□□□□□ -2.09
SHC1P29353 MTCYBP9-201ENST00000431021 303 ntBASIC1.98□□□□□ -2.09
SHC1P29353 IPO7P1-201ENST00000442031 636 ntBASIC1.98□□□□□ -2.09
SHC1P29353 MTCO3P8-201ENST00000453691 755 ntBASIC1.98□□□□□ -2.09
SHC1P29353 snoU13.6-201ENST00000458785 104 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AC090255.1-201ENST00000495779 349 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AC016632.1-201ENST00000503994 196 ntBASIC1.98□□□□□ -2.09
SHC1P29353 MTCO2P24-201ENST00000515611 426 ntBASIC1.98□□□□□ -2.09
SHC1P29353 RNU5F-2P-201ENST00000516066 82 ntBASIC1.98□□□□□ -2.09
SHC1P29353 Y_RNA.706-201ENST00000516933 99 ntBASIC1.98□□□□□ -2.09
SHC1P29353 SCARNA3-201ENST00000517097 143 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AC109329.1-201ENST00000518744 317 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC1.98□□□□□ -2.09
SHC1P29353 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.98□□□□□ -2.09
SHC1P29353 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC1.98□□□□□ -2.09
SHC1P29353 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.98□□□□□ -2.09
SHC1P29353 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.98□□□□□ -2.09
SHC1P29353 7SK.7-201ENST00000603504 247 ntBASIC1.98□□□□□ -2.09
SHC1P29353 Z98751.3-201ENST00000604447 521 ntBASIC1.98□□□□□ -2.09
SHC1P29353 AL021879.1-201ENST00000611756 288 ntBASIC1.98□□□□□ -2.09
SHC1P29353 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.98□□□□□ -2.09
SHC1P29353 AC009831.4-201ENST00000620744 325 ntBASIC1.98□□□□□ -2.09
SHC1P29353 7SK.10-201ENST00000621414 298 ntBASIC1.98□□□□□ -2.09
SHC1P29353 ZNF658B-202ENST00000615961 3375 ntBASIC1.98□□□□□ -2.09
SHC1P29353 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHC1P29353 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHC1P29353 AC131280.1-202ENST00000624067 4211 ntBASIC1.97□□□□□ -2.09
SHC1P29353 Y_RNA.26-201ENST00000362539 101 ntBASIC1.97□□□□□ -2.09
SHC1P29353 Y_RNA.214-201ENST00000364201 112 ntBASIC1.97□□□□□ -2.09
SHC1P29353 Y_RNA.380-201ENST00000365663 111 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RNU1-52P-201ENST00000384190 164 ntBASIC1.97□□□□□ -2.09
SHC1P29353 SNORA26.3-201ENST00000391119 136 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RN7SKP223-201ENST00000410582 62 ntBASIC1.97□□□□□ -2.09
SHC1P29353 ELOCP20-201ENST00000422460 345 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AL590556.1-201ENST00000423231 483 ntBASIC1.97□□□□□ -2.09
SHC1P29353 HMGN2P38-201ENST00000423806 265 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.97□□□□□ -2.09
SHC1P29353 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.97□□□□□ -2.09
SHC1P29353 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.97□□□□□ -2.09
SHC1P29353 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC1.97□□□□□ -2.09
SHC1P29353 AC107032.1-201ENST00000485945 480 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AC132942.1-201ENST00000486753 483 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AC010469.2-201ENST00000496412 480 ntBASIC1.97□□□□□ -2.09
SHC1P29353 MRPS35P2-201ENST00000508242 191 ntBASIC1.97□□□□□ -2.09
SHC1P29353 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC1.97□□□□□ -2.09
SHC1P29353 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.97□□□□□ -2.09
SHC1P29353 SNORA25.11-201ENST00000515935 105 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RNU6-911P-201ENST00000516523 104 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RNU6-635P-201ENST00000516651 102 ntBASIC1.97□□□□□ -2.09
SHC1P29353 Y_RNA.715-201ENST00000517082 110 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AC131281.1-201ENST00000522984 164 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC1.97□□□□□ -2.09
SHC1P29353 MIR5694-201ENST00000581190 76 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AP000942.4-201ENST00000604811 241 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RNU6-91P-201ENST00000607774 107 ntBASIC1.97□□□□□ -2.09
SHC1P29353 RMST_6.1-201ENST00000611980 203 ntBASIC1.97□□□□□ -2.09
SHC1P29353 AC007792.1-201ENST00000623023 402 ntBASIC1.97□□□□□ -2.09
SHC1P29353 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHC1P29353 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
SHC1P29353 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.96□□□□□ -2.1
SHC1P29353 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
SHC1P29353 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SHC1P29353 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHC1P29353 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHC1P29353 AC092268.1-201ENST00000342691 405 ntBASIC1.96□□□□□ -2.1
SHC1P29353 SNORD115-32-201ENST00000364079 82 ntBASIC1.96□□□□□ -2.1
SHC1P29353 Y_RNA.210-201ENST00000364161 110 ntBASIC1.96□□□□□ -2.1
SHC1P29353 Y_RNA.222-201ENST00000364264 102 ntBASIC1.96□□□□□ -2.1
SHC1P29353 RNU6-806P-201ENST00000365147 105 ntBASIC1.96□□□□□ -2.1
SHC1P29353 Y_RNA.574-201ENST00000384766 95 ntBASIC1.96□□□□□ -2.1
SHC1P29353 MIR549A-201ENST00000385268 96 ntBASIC1.96□□□□□ -2.1
SHC1P29353 MIR147B-201ENST00000390185 80 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL023284.1-201ENST00000403956 276 ntBASIC1.96□□□□□ -2.1
SHC1P29353 RNU6-130P-201ENST00000411112 103 ntBASIC1.96□□□□□ -2.1
SHC1P29353 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.96□□□□□ -2.1
SHC1P29353 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
SHC1P29353 AC138623.1-201ENST00000418060 216 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL590135.1-201ENST00000422215 156 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC012306.1-201ENST00000423267 114 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC019205.3-201ENST00000424573 156 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AIMP1P2-201ENST00000425294 312 ntBASIC1.96□□□□□ -2.1
SHC1P29353 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.96□□□□□ -2.1
SHC1P29353 Z98742.2-201ENST00000431564 187 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AL445305.1-201ENST00000432577 575 ntBASIC1.96□□□□□ -2.1
SHC1P29353 AC016700.2-201ENST00000446011 156 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms